Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC007435.1-201ENST00000421086 415 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AL592293.2-201ENST00000422292 996 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 MTCO1P3-201ENST00000429327 192 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 B3GNT2P1-201ENST00000434960 952 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AC112653.1-201ENST00000443851 386 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AC005002.1-201ENST00000447458 540 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.87□□□□□ -1.79
USP43Q70EL4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.87□□□□□ -1.79
USP43Q70EL4 RNU6-1218P-201ENST00000458990 108 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AL121769.1-201ENST00000469473 401 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.87□□□□□ -1.79
USP43Q70EL4 AL161747.1-201ENST00000480068 358 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.87□□□□□ -1.79
USP43Q70EL4 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.87□□□□□ -1.79
USP43Q70EL4 SNORD116-26-201ENST00000516006 96 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 RN7SKP21-201ENST00000516503 220 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 NARSP2-201ENST00000518524 679 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.87□□□□□ -1.79
USP43Q70EL4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.87□□□□□ -1.79
USP43Q70EL4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.87□□□□□ -1.79
USP43Q70EL4 OR5M2P-201ENST00000529003 936 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 OR4C2P-201ENST00000530855 1064 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
USP43Q70EL4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.87□□□□□ -1.79
USP43Q70EL4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.87□□□□□ -1.79
USP43Q70EL4 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.87□□□□□ -1.79
USP43Q70EL4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.87□□□□□ -1.79
USP43Q70EL4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.87□□□□□ -1.79
USP43Q70EL4 AC105129.1-201ENST00000560250 297 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.87□□□□□ -1.79
USP43Q70EL4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.87□□□□□ -1.79
USP43Q70EL4 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.87□□□□□ -1.79
USP43Q70EL4 RPL12P25-202ENST00000598100 674 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 U73023.1-201ENST00000603134 700 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AC083899.3-201ENST00000603413 594 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AC087045.1-201ENST00000605856 382 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AL391497.1-201ENST00000608671 547 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 MLECP1-201ENST00000615893 709 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.87□□□□□ -1.79
USP43Q70EL4 AC119674.1-212ENST00000641155 993 ntBASIC3.87□□□□□ -1.79
USP43Q70EL4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
USP43Q70EL4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP43Q70EL4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
USP43Q70EL4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP43Q70EL4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP43Q70EL4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP43Q70EL4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USP43Q70EL4 AC007529.1-201ENST00000418574 2178 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP43Q70EL4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP43Q70EL4 AC108467.2-201ENST00000617640 1597 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP43Q70EL4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.86□□□□□ -1.79
USP43Q70EL4 AL121657.1-201ENST00000327215 531 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 RPL23AP26-201ENST00000412728 464 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 AC013404.1-201ENST00000413068 249 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 NRBF2P2-201ENST00000413087 861 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.86□□□□□ -1.79
USP43Q70EL4 RPL7P44-201ENST00000424827 742 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.86□□□□□ -1.79
USP43Q70EL4 AL138785.1-201ENST00000425821 331 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 AC004975.1-201ENST00000428733 208 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 OR2B7P-201ENST00000429302 934 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.86□□□□□ -1.79
USP43Q70EL4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.86□□□□□ -1.79
USP43Q70EL4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
USP43Q70EL4 TRIM60P18-201ENST00000441518 828 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 AL662791.1-201ENST00000441992 928 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.86□□□□□ -1.79
USP43Q70EL4 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.86□□□□□ -1.79
USP43Q70EL4 MTND1P18-201ENST00000448191 573 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.86□□□□□ -1.79
USP43Q70EL4 RPL7L1P8-201ENST00000469911 741 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 NCOR1P1-202ENST00000486162 291 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.86□□□□□ -1.79
USP43Q70EL4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USP43Q70EL4 RNU6-875P-201ENST00000516488 106 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 RNU6-1153P-201ENST00000516760 105 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.86□□□□□ -1.79
USP43Q70EL4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.86□□□□□ -1.79
USP43Q70EL4 AC083923.1-201ENST00000523708 376 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.86□□□□□ -1.79
USP43Q70EL4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.86□□□□□ -1.79
USP43Q70EL4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.86□□□□□ -1.79
USP43Q70EL4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.86□□□□□ -1.79
USP43Q70EL4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.86□□□□□ -1.79
USP43Q70EL4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.86□□□□□ -1.79
USP43Q70EL4 AC069061.3-201ENST00000582254 823 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 AC008507.1-201ENST00000587506 734 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 AC103881.1-201ENST00000603476 538 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 AP005137.2-201ENST00000609238 400 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 AC005962.2-201ENST00000611427 652 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 AC064801.1-201ENST00000612025 407 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 AC025594.3-201ENST00000613068 790 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 AP005264.7-201ENST00000625003 745 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP43Q70EL4 MAPK10-373ENST00000641983 6772 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP43Q70EL4 ASNSP1-204ENST00000641977 1664 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms