Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
C11orf88Q6PI97 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 TAB3P1-202ENST00000452645 1634 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 LARP1BP1-201ENST00000506036 1359 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AC126755.2-208ENST00000327792 462 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AC138969.1-213ENST00000331436 462 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 SNORD116.1-201ENST00000365628 92 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AL590704.1-201ENST00000402856 794 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AL356320.2-201ENST00000417263 507 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 TMEM167AP1-201ENST00000423409 219 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 PHBP16-201ENST00000446318 950 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 ZNF886P-201ENST00000450781 723 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 RPS11P1-201ENST00000451072 473 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 RPL26P28-201ENST00000451325 435 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 NANOGP10-201ENST00000453325 895 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AC092155.2-201ENST00000454675 477 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 RNU7-136P-201ENST00000458819 69 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 snoU13.8-201ENST00000458890 104 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AL672167.3-201ENST00000465951 960 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AC108729.1-201ENST00000487812 947 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 RPL7P38-201ENST00000488396 739 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AC116353.3-201ENST00000511215 249 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 MTATP6P9-201ENST00000515039 680 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AC103783.1-201ENST00000520506 373 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 FAM60DP-201ENST00000524174 632 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 PSMB7P1-201ENST00000556349 514 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AC091057.3-201ENST00000602684 733 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AC006270.3-201ENST00000605967 1036 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AC064801.1-201ENST00000612025 407 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 AL021997.2-201ENST00000615674 271 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 U7.8-201ENST00000619968 63 ntBASIC3.56□□□□□ -1.84
C11orf88Q6PI97 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
C11orf88Q6PI97 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 RPL23AP57-201ENST00000332361 466 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 Y_RNA.311-201ENST00000365068 96 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 ERHP2-201ENST00000402323 299 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 RN7SKP263-201ENST00000411194 309 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 TPMTP2-201ENST00000414372 726 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 MRPL50P2-201ENST00000416821 482 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 AC092648.1-201ENST00000425870 423 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 VN1R25P-201ENST00000443385 738 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 VN1R40P-201ENST00000455196 941 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 RPL31P60-201ENST00000478450 367 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 RPL30P14-201ENST00000482744 348 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 AC119751.4-201ENST00000507498 357 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 AC109445.1-201ENST00000512356 383 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 SNORA70.16-201ENST00000516390 95 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.55□□□□□ -1.84
C11orf88Q6PI97 AC093331.1-201ENST00000521474 169 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 AC008489.1-201ENST00000524271 483 ntBASIC3.55□□□□□ -1.84
C11orf88Q6PI97 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms