Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC104662.1-201ENST00000604448 511 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AL022154.1-201ENST00000604698 785 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AC025253.1-201ENST00000613623 543 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AL445567.2-201ENST00000618935 498 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 MIR8059-201ENST00000620427 81 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AC079228.1-201ENST00000624774 1049 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 ELF2P3-201ENST00000445099 1506 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 CYP1D1P-201ENST00000416662 1433 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 MTND4P16-201ENST00000466108 1367 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 RNU6-492P-201ENST00000363035 104 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 Y_RNA.256-201ENST00000364594 104 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 HMGN1P14-201ENST00000412459 517 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 USP9YP6-201ENST00000413550 854 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AC245052.5-201ENST00000416320 649 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 OFD1P18Y-201ENST00000420889 959 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AL389915.1-201ENST00000422463 466 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 MTCO3P21-201ENST00000430791 643 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AC011742.1-201ENST00000431448 434 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 RAB11AP1-201ENST00000442978 646 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 SLC31A1P1-201ENST00000451221 567 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AL354710.1-201ENST00000453641 246 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 USP9YP34-201ENST00000453983 808 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 RPS26P15-201ENST00000488067 348 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AC108941.1-201ENST00000502853 530 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 FAM92A1P2-202ENST00000504766 877 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 PRDX4P1-201ENST00000507189 574 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 RNU6-528P-201ENST00000516926 100 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 SNORA48.10-201ENST00000516965 160 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 HIGD1AP6-201ENST00000521833 279 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AP003730.1-201ENST00000524605 285 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 DEFB108A-201ENST00000530110 222 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 ADI1P3-201ENST00000549509 470 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AC090970.3-201ENST00000612566 866 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AC091834.1-201ENST00000614543 472 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AC092794.2-201ENST00000620933 563 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 MIR4727-201ENST00000622232 55 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 FAM157B-203ENST00000639350 358 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 AC009313.2-201ENST00000417893 1941 ntBASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.03□□□□□ -1.76
ZNF549Q6P9A3 DBF4P1-201ENST00000412976 1892 ntBASIC4.03□□□□□ -1.77
ZNF549Q6P9A3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 AL031985.3-201ENST00000565390 2449 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 RNU6-216P-201ENST00000363282 104 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 RNU6-723P-201ENST00000383973 107 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 MIR181A1-201ENST00000385026 110 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 RNU11-4P-201ENST00000391149 133 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 AC000111.3-201ENST00000433478 193 ntBASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.02□□□□□ -1.77
ZNF549Q6P9A3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms