Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC022018.1-201ENST00000430685 241 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 RPL31P53-201ENST00000457065 348 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 snoU13.7-201ENST00000459220 104 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 RPL21P41-201ENST00000459863 264 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 AP000852.1-201ENST00000472460 573 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 AC103975.1-201ENST00000482506 483 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 DSTNP2-201ENST00000504533 515 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 FAM60DP-201ENST00000524174 632 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 AC024560.3-201ENST00000608482 349 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 AL020991.1-201ENST00000612314 373 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 CYCSP41-201ENST00000616920 296 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 AC007318.2-201ENST00000620999 243 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 RNU6-156P-201ENST00000621869 107 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 AC103798.2-201ENST00000624292 632 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 AC009039.2-201ENST00000624524 529 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 RPL9P7-201ENST00000330965 580 ntBASIC2.22□□□□□ -2.05
HIST1H1AQ02539 AC073325.2-201ENST00000339545 159 ntBASIC2.22□□□□□ -2.05
HIST1H1AQ02539 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 RNVU1-14-201ENST00000384770 164 ntBASIC2.22□□□□□ -2.05
HIST1H1AQ02539 MIR592-201ENST00000384959 97 ntBASIC2.22□□□□□ -2.05
HIST1H1AQ02539 AC073310.1-201ENST00000423226 1033 ntBASIC2.22□□□□□ -2.05
HIST1H1AQ02539 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 AC234775.1-201ENST00000454247 670 ntBASIC2.22□□□□□ -2.05
HIST1H1AQ02539 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 AC002456.2-201ENST00000509356 380 ntBASIC2.22□□□□□ -2.05
HIST1H1AQ02539 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 AC074250.1-201ENST00000511117 192 ntBASIC2.22□□□□□ -2.05
HIST1H1AQ02539 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 RPPH1-2P-201ENST00000516688 293 ntBASIC2.22□□□□□ -2.05
HIST1H1AQ02539 ERHP1-201ENST00000523006 310 ntBASIC2.22□□□□□ -2.05
HIST1H1AQ02539 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 DUXAP3-201ENST00000603616 594 ntBASIC2.22□□□□□ -2.05
HIST1H1AQ02539 MIR6798-201ENST00000612887 67 ntBASIC2.22□□□□□ -2.05
HIST1H1AQ02539 AL162274.2-201ENST00000614406 332 ntBASIC2.22□□□□□ -2.05
HIST1H1AQ02539 AC026422.1-201ENST00000623961 452 ntBASIC2.22□□□□□ -2.05
HIST1H1AQ02539 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HIST1H1AQ02539 AC026241.1-201ENST00000517873 2142 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 RNA5SP393-201ENST00000363423 117 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 SNORA71.1-201ENST00000364523 117 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 RNU6-1180P-201ENST00000364935 107 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 RNU1-138P-201ENST00000384093 164 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 MTCO3P4-201ENST00000419236 787 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 RPL21P32-201ENST00000419877 477 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 AL606495.1-201ENST00000422100 813 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 RABEPKP1-201ENST00000440529 1026 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 FTH1P2-201ENST00000466086 412 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 RPL27AP5-201ENST00000469428 449 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 RPL7P49-201ENST00000471402 708 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 RN7SL504P-201ENST00000494496 287 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 AC010625.1-201ENST00000511296 403 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 AC009812.2-201ENST00000517657 457 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 AP000857.1-201ENST00000532151 543 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 MIR4429-201ENST00000580105 73 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 AL049779.4-201ENST00000604500 156 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms