Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL583835.1-201ENST00000399570 407 ntBASIC3.91□□□□□ -1.78
CDH12P55289 AC136624.1-201ENST00000400791 413 ntBASIC3.91□□□□□ -1.78
CDH12P55289 HSPD1P16-201ENST00000402302 394 ntBASIC3.91□□□□□ -1.78
CDH12P55289 RPL23AP48-201ENST00000406913 488 ntBASIC3.91□□□□□ -1.78
CDH12P55289 SNORA11F-201ENST00000408237 128 ntBASIC3.91□□□□□ -1.78
CDH12P55289 MIR1179-201ENST00000408703 91 ntBASIC3.91□□□□□ -1.78
CDH12P55289 HMGN1P14-201ENST00000412459 517 ntBASIC3.91□□□□□ -1.78
CDH12P55289 RPL31P2-201ENST00000413849 377 ntBASIC3.91□□□□□ -1.78
CDH12P55289 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH12P55289 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH12P55289 AL513174.1-201ENST00000423182 629 ntBASIC3.91□□□□□ -1.78
CDH12P55289 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH12P55289 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH12P55289 AL772161.1-201ENST00000439130 476 ntBASIC3.91□□□□□ -1.78
CDH12P55289 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH12P55289 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH12P55289 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH12P55289 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH12P55289 AL162388.1-201ENST00000450912 352 ntBASIC3.91□□□□□ -1.78
CDH12P55289 BX276092.4-201ENST00000452056 248 ntBASIC3.91□□□□□ -1.78
CDH12P55289 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH12P55289 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH12P55289 RAD23BP3-201ENST00000454157 1152 ntBASIC3.91□□□□□ -1.78
CDH12P55289 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.91□□□□□ -1.78
CDH12P55289 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH12P55289 RPS26P15-201ENST00000488067 348 ntBASIC3.91□□□□□ -1.78
CDH12P55289 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH12P55289 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH12P55289 CDC42P4-201ENST00000510507 563 ntBASIC3.91□□□□□ -1.78
CDH12P55289 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH12P55289 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH12P55289 RN7SKP82-201ENST00000516786 223 ntBASIC3.91□□□□□ -1.78
CDH12P55289 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH12P55289 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH12P55289 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH12P55289 OR5AN2P-201ENST00000534535 896 ntBASIC3.91□□□□□ -1.78
CDH12P55289 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH12P55289 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
CDH12P55289 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH12P55289 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH12P55289 AC010546.1-201ENST00000569391 485 ntBASIC3.91□□□□□ -1.78
CDH12P55289 EIF1P4-201ENST00000572664 335 ntBASIC3.91□□□□□ -1.78
CDH12P55289 MIR4528-201ENST00000577763 90 ntBASIC3.91□□□□□ -1.78
CDH12P55289 AC067852.4-201ENST00000590314 478 ntBASIC3.91□□□□□ -1.78
CDH12P55289 AC022916.3-201ENST00000592961 742 ntBASIC3.91□□□□□ -1.78
CDH12P55289 BBIP1P1-201ENST00000602999 279 ntBASIC3.91□□□□□ -1.78
CDH12P55289 AC091805.2-201ENST00000603848 235 ntBASIC3.91□□□□□ -1.78
CDH12P55289 AC025588.3-201ENST00000604182 274 ntBASIC3.91□□□□□ -1.78
CDH12P55289 AC113403.1-201ENST00000604910 193 ntBASIC3.91□□□□□ -1.78
CDH12P55289 NDUFA8P1-201ENST00000605525 367 ntBASIC3.91□□□□□ -1.78
CDH12P55289 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.91□□□□□ -1.78
CDH12P55289 AC006566.1-201ENST00000608943 513 ntBASIC3.91□□□□□ -1.78
CDH12P55289 AC018755.4-201ENST00000619715 454 ntBASIC3.91□□□□□ -1.78
CDH12P55289 AC012020.1-201ENST00000624541 1728 ntBASIC3.91□□□□□ -1.78
CDH12P55289 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH12P55289 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH12P55289 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH12P55289 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH12P55289 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH12P55289 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CDH12P55289 NOL8P1-201ENST00000508336 3529 ntBASIC3.91□□□□□ -1.78
CDH12P55289 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.91□□□□□ -1.78
CDH12P55289 AC025031.4-201ENST00000621248 3271 ntBASIC3.9□□□□□ -1.78
CDH12P55289 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDH12P55289 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDH12P55289 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDH12P55289 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.9□□□□□ -1.78
CDH12P55289 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.9□□□□□ -1.78
CDH12P55289 Z73965.1-201ENST00000623412 2297 ntBASIC3.9□□□□□ -1.79
CDH12P55289 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH12P55289 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH12P55289 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH12P55289 SNORD82-201ENST00000365530 70 ntBASIC3.9□□□□□ -1.79
CDH12P55289 RNU6-730P-201ENST00000383954 104 ntBASIC3.9□□□□□ -1.79
CDH12P55289 RNA5SP332-201ENST00000391063 115 ntBASIC3.9□□□□□ -1.79
CDH12P55289 RPS3AP23-201ENST00000401762 784 ntBASIC3.9□□□□□ -1.79
CDH12P55289 AL590139.1-201ENST00000416267 400 ntBASIC3.9□□□□□ -1.79
CDH12P55289 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH12P55289 GLRXP1-201ENST00000423261 334 ntBASIC3.9□□□□□ -1.79
CDH12P55289 AC010975.2-201ENST00000427781 588 ntBASIC3.9□□□□□ -1.79
CDH12P55289 RPL23AP52-201ENST00000439311 478 ntBASIC3.9□□□□□ -1.79
CDH12P55289 HSPE1P28-201ENST00000443139 211 ntBASIC3.9□□□□□ -1.79
CDH12P55289 AP000542.1-201ENST00000448473 371 ntBASIC3.9□□□□□ -1.79
CDH12P55289 RPL7P31-201ENST00000450192 724 ntBASIC3.9□□□□□ -1.79
CDH12P55289 USP9YP12-201ENST00000450481 570 ntBASIC3.9□□□□□ -1.79
CDH12P55289 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CDH12P55289 SNORD42A-201ENST00000459584 64 ntBASIC3.9□□□□□ -1.79
CDH12P55289 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CDH12P55289 AC022034.3-201ENST00000471393 478 ntBASIC3.9□□□□□ -1.79
CDH12P55289 AC083829.1-201ENST00000503756 657 ntBASIC3.9□□□□□ -1.79
CDH12P55289 BNIP3P41-201ENST00000503774 571 ntBASIC3.9□□□□□ -1.79
CDH12P55289 AC111000.3-201ENST00000508057 576 ntBASIC3.9□□□□□ -1.79
CDH12P55289 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH12P55289 VWA8P1-201ENST00000510889 176 ntBASIC3.9□□□□□ -1.79
CDH12P55289 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH12P55289 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH12P55289 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH12P55289 RN7SKP92-201ENST00000517266 244 ntBASIC3.9□□□□□ -1.79
CDH12P55289 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH12P55289 AC022790.1-201ENST00000522872 204 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms