Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCN3P51790 RNU6-1122P-201ENST00000384449 107 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCN3P51790 ATP5F1P4-201ENST00000397288 746 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 MIR1302-8-201ENST00000408342 128 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 RNU6-757P-201ENST00000410334 100 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 RNA5SP44-201ENST00000410446 133 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCN3P51790 ATP5A1P2-201ENST00000412323 255 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCN3P51790 ZNF885P-201ENST00000420174 1098 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 PTP4A1P5-201ENST00000420305 455 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 AL365203.2-201ENST00000423444 196 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.11□□□□□ -1.75
CLCN3P51790 NANOGP6-201ENST00000429190 847 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.11□□□□□ -1.75
CLCN3P51790 HSPD1P21-201ENST00000436541 245 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCN3P51790 RSL24D1P3-201ENST00000449255 495 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 AC104978.1-201ENST00000449387 391 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 AC104073.1-201ENST00000451988 151 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.11□□□□□ -1.75
CLCN3P51790 AC146507.1-201ENST00000468335 354 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.11□□□□□ -1.75
CLCN3P51790 AC006499.5-201ENST00000505037 514 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 AC091435.1-201ENST00000505442 584 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCN3P51790 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.11□□□□□ -1.75
CLCN3P51790 AC092470.1-201ENST00000546187 132 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.11□□□□□ -1.75
CLCN3P51790 AC112220.3-201ENST00000605502 502 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 AC122108.2-201ENST00000611946 526 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 AL391261.4-201ENST00000616012 481 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 AC092184.1-201ENST00000625042 715 ntBASIC4.11□□□□□ -1.75
CLCN3P51790 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.11□□□□□ -1.75
CLCN3P51790 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLCN3P51790 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCN3P51790 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CLCN3P51790 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLCN3P51790 AC097504.1-201ENST00000515103 2415 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
CLCN3P51790 SNORA63.1-201ENST00000362493 131 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 RNU6-657P-201ENST00000383904 107 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 AL024474.1-201ENST00000404655 591 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 RNA5SP39-201ENST00000411245 120 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLCN3P51790 RPL31P45-201ENST00000419532 356 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 AC006946.1-201ENST00000429106 328 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 MTND4P6-201ENST00000438297 472 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 AL606662.1-201ENST00000445763 553 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.1□□□□□ -1.75
CLCN3P51790 RPS3AP46-201ENST00000448352 682 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 AL451050.1-201ENST00000450126 415 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 RPL26P28-201ENST00000451325 435 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCN3P51790 FGF7P3-201ENST00000454645 303 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 MTCO3P11-201ENST00000455103 774 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.1□□□□□ -1.75
CLCN3P51790 snoU13.22-201ENST00000459428 104 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 RAP1BP2-201ENST00000478270 544 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.1□□□□□ -1.75
CLCN3P51790 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCN3P51790 RN7SKP18-201ENST00000516005 275 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 AC008802.1-201ENST00000519121 791 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 OR5AK1P-201ENST00000524837 922 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.1□□□□□ -1.75
CLCN3P51790 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCN3P51790 AC008011.1-201ENST00000545989 227 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 AC008127.2-201ENST00000549925 1075 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.1□□□□□ -1.75
CLCN3P51790 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCN3P51790 HMGB3P26-201ENST00000560051 582 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCN3P51790 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.1□□□□□ -1.75
CLCN3P51790 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.1□□□□□ -1.75
CLCN3P51790 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.1□□□□□ -1.75
CLCN3P51790 AC245297.2-201ENST00000610119 565 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 AC012314.7-201ENST00000619693 93 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 AC092650.2-201ENST00000619984 902 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 MIR4727-201ENST00000622232 55 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLCN3P51790 PABPC1P7-201ENST00000413177 1513 ntBASIC4.1□□□□□ -1.75
CLCN3P51790 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CLCN3P51790 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLCN3P51790 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLCN3P51790 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLCN3P51790 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLCN3P51790 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLCN3P51790 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.09□□□□□ -1.75
CLCN3P51790 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CLCN3P51790 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
CLCN3P51790 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLCN3P51790 MAPK10-372ENST00000641954 3413 ntBASIC4.09□□□□□ -1.75
CLCN3P51790 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.09□□□□□ -1.75
CLCN3P51790 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CLCN3P51790 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CLCN3P51790 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLCN3P51790 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms