Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.72□□□□□ -1.81
APOBEC1P41238 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.72□□□□□ -1.81
APOBEC1P41238 NANOGP6-201ENST00000429190 847 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.72□□□□□ -1.81
APOBEC1P41238 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
APOBEC1P41238 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.72□□□□□ -1.81
APOBEC1P41238 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.72□□□□□ -1.81
APOBEC1P41238 SDCBPP1-201ENST00000440192 890 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
APOBEC1P41238 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.72□□□□□ -1.81
APOBEC1P41238 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.72□□□□□ -1.81
APOBEC1P41238 AL451050.1-201ENST00000450126 415 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 NDUFS5P3-201ENST00000450668 321 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 HMGB1P15-201ENST00000453854 435 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 AP001992.1-205ENST00000462248 379 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 RPS23P7-201ENST00000466210 444 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
APOBEC1P41238 AC010618.1-201ENST00000469924 477 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.72□□□□□ -1.81
APOBEC1P41238 CEACAMP10-202ENST00000495431 496 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 AC080014.1-201ENST00000496877 1201 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.72□□□□□ -1.81
APOBEC1P41238 AC021678.1-201ENST00000505195 936 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 AC022447.3-201ENST00000506865 495 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 AC093853.1-201ENST00000515689 483 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 RNU7-143P-201ENST00000516781 65 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 RNU4-60P-201ENST00000517239 135 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.72□□□□□ -1.81
APOBEC1P41238 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.72□□□□□ -1.81
APOBEC1P41238 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.72□□□□□ -1.81
APOBEC1P41238 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.72□□□□□ -1.81
APOBEC1P41238 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.72□□□□□ -1.81
APOBEC1P41238 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.72□□□□□ -1.81
APOBEC1P41238 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.72□□□□□ -1.81
APOBEC1P41238 AC008507.1-201ENST00000587506 734 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.72□□□□□ -1.81
APOBEC1P41238 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.72□□□□□ -1.81
APOBEC1P41238 AC010680.3-201ENST00000604215 520 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 RNA5SP108-201ENST00000605921 117 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 AC097468.3-201ENST00000607956 456 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 AC245008.1-201ENST00000608123 476 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 AC103710.4-201ENST00000609301 899 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.72□□□□□ -1.81
APOBEC1P41238 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.72□□□□□ -1.81
APOBEC1P41238 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.72□□□□□ -1.81
APOBEC1P41238 OR52H1-202ENST00000641796 1061 ntBASIC3.72□□□□□ -1.81
APOBEC1P41238 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.72□□□□□ -1.81
APOBEC1P41238 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
APOBEC1P41238 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.72□□□□□ -1.81
APOBEC1P41238 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
APOBEC1P41238 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
APOBEC1P41238 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
APOBEC1P41238 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
APOBEC1P41238 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
APOBEC1P41238 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.71□□□□□ -1.82
APOBEC1P41238 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBEC1P41238 SNORA62-201ENST00000365493 153 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 SNORA37-201ENST00000384504 129 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 MIR141-201ENST00000384975 95 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 U3.29-201ENST00000391296 212 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 AC025750.1-201ENST00000399891 379 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 RNA5SP56-201ENST00000410277 118 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 RN7SKP33-201ENST00000410942 340 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.71□□□□□ -1.82
APOBEC1P41238 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBEC1P41238 RPS27AP14-201ENST00000422868 454 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 RWDD4P2-201ENST00000426392 563 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.71□□□□□ -1.82
APOBEC1P41238 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.71□□□□□ -1.82
APOBEC1P41238 AL365184.2-201ENST00000431139 435 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.71□□□□□ -1.82
APOBEC1P41238 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
APOBEC1P41238 LARP1BP3-201ENST00000437229 869 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.71□□□□□ -1.82
APOBEC1P41238 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.71□□□□□ -1.82
APOBEC1P41238 AC009220.1-201ENST00000451614 275 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 FGF7P3-201ENST00000454645 303 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 MTND4LP3-201ENST00000468320 276 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.71□□□□□ -1.82
APOBEC1P41238 OR2A20P-203ENST00000498397 1268 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 AC083829.1-201ENST00000503756 657 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.71□□□□□ -1.82
APOBEC1P41238 SNORA31.9-201ENST00000516429 84 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.71□□□□□ -1.82
APOBEC1P41238 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.71□□□□□ -1.82
APOBEC1P41238 AC013828.2-201ENST00000532487 235 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 CYCSP29-201ENST00000533731 318 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.71□□□□□ -1.82
APOBEC1P41238 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
APOBEC1P41238 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.71□□□□□ -1.82
APOBEC1P41238 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.71□□□□□ -1.82
APOBEC1P41238 GTF2IP22-201ENST00000554443 182 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 AC107954.1-201ENST00000565906 727 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 MTCYBP33-201ENST00000575007 1130 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.71□□□□□ -1.82
APOBEC1P41238 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.71□□□□□ -1.82
APOBEC1P41238 MIR5684-201ENST00000585074 65 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 AL669831.4-202ENST00000590817 238 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 AL451044.1-201ENST00000604867 238 ntBASIC3.71□□□□□ -1.82
APOBEC1P41238 AL031775.1-201ENST00000607014 887 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms