Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.79□□□□□ -1.8
USP6P35125 AC121161.1-201ENST00000510606 652 ntBASIC3.79□□□□□ -1.8
USP6P35125 RNU6-334P-201ENST00000517072 102 ntBASIC3.79□□□□□ -1.8
USP6P35125 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.79□□□□□ -1.8
USP6P35125 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.79□□□□□ -1.8
USP6P35125 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.79□□□□□ -1.8
USP6P35125 AC093510.2-201ENST00000562820 896 ntBASIC3.79□□□□□ -1.8
USP6P35125 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
USP6P35125 VN1R78P-201ENST00000597393 564 ntBASIC3.79□□□□□ -1.8
USP6P35125 AC026741.1-201ENST00000605892 482 ntBASIC3.79□□□□□ -1.8
USP6P35125 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.79□□□□□ -1.8
USP6P35125 U6.48-201ENST00000618523 106 ntBASIC3.79□□□□□ -1.8
USP6P35125 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.79□□□□□ -1.8
USP6P35125 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.79□□□□□ -1.8
USP6P35125 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP6P35125 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP6P35125 MTND4P31-201ENST00000425607 1343 ntBASIC3.79□□□□□ -1.8
USP6P35125 MIR1303-201ENST00000408625 86 ntBASIC3.78□□□□□ -1.8
USP6P35125 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP6P35125 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.78□□□□□ -1.8
USP6P35125 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.78□□□□□ -1.8
USP6P35125 RPL31P12-201ENST00000422587 358 ntBASIC3.78□□□□□ -1.8
USP6P35125 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.78□□□□□ -1.8
USP6P35125 MTCO1P43-201ENST00000431831 488 ntBASIC3.78□□□□□ -1.8
USP6P35125 AL353597.2-202ENST00000434901 373 ntBASIC3.78□□□□□ -1.8
USP6P35125 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.78□□□□□ -1.8
USP6P35125 MTND6P18-201ENST00000439477 513 ntBASIC3.78□□□□□ -1.8
USP6P35125 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP6P35125 UQCRHP3-201ENST00000451503 251 ntBASIC3.78□□□□□ -1.8
USP6P35125 NECAP1P2-201ENST00000455668 727 ntBASIC3.78□□□□□ -1.8
USP6P35125 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
USP6P35125 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.78□□□□□ -1.8
USP6P35125 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
USP6P35125 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.78□□□□□ -1.8
USP6P35125 IGKV2-36-201ENST00000519999 223 ntBASIC3.78□□□□□ -1.8
USP6P35125 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.78□□□□□ -1.8
USP6P35125 MTND4LP24-201ENST00000572277 291 ntBASIC3.78□□□□□ -1.8
USP6P35125 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.78□□□□□ -1.8
USP6P35125 AP003117.1-201ENST00000602771 554 ntBASIC3.78□□□□□ -1.8
USP6P35125 AL590808.1-201ENST00000618696 141 ntBASIC3.78□□□□□ -1.8
USP6P35125 MTCO1P18-201ENST00000455518 1419 ntBASIC3.78□□□□□ -1.8
USP6P35125 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
USP6P35125 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
USP6P35125 AC108206.1-201ENST00000570186 4159 ntBASIC3.78□□□□□ -1.8
USP6P35125 RNU6-543P-201ENST00000362576 108 ntBASIC3.78□□□□□ -1.8
USP6P35125 RNA5SP27-201ENST00000363839 119 ntBASIC3.78□□□□□ -1.8
USP6P35125 RNU6-146P-201ENST00000384602 108 ntBASIC3.78□□□□□ -1.8
USP6P35125 AL139039.1-201ENST00000401900 692 ntBASIC3.78□□□□□ -1.8
USP6P35125 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.78□□□□□ -1.8
USP6P35125 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.78□□□□□ -1.8
USP6P35125 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP6P35125 RPS20P5-201ENST00000434808 360 ntBASIC3.78□□□□□ -1.8
USP6P35125 AL513328.1-201ENST00000446460 224 ntBASIC3.78□□□□□ -1.8
USP6P35125 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.78□□□□□ -1.8
USP6P35125 AC003982.1-202ENST00000469928 248 ntBASIC3.78□□□□□ -1.8
USP6P35125 RN7SL442P-201ENST00000473804 320 ntBASIC3.78□□□□□ -1.8
USP6P35125 AC090525.1-201ENST00000479116 478 ntBASIC3.78□□□□□ -1.8
USP6P35125 AC006445.2-201ENST00000510061 472 ntBASIC3.78□□□□□ -1.8
USP6P35125 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.78□□□□□ -1.8
USP6P35125 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.78□□□□□ -1.8
USP6P35125 C1DP5-201ENST00000525775 383 ntBASIC3.78□□□□□ -1.8
USP6P35125 ATP5F1P7-201ENST00000567330 760 ntBASIC3.78□□□□□ -1.8
USP6P35125 AC115085.1-201ENST00000588924 229 ntBASIC3.78□□□□□ -1.8
USP6P35125 VN1R9P-201ENST00000614184 867 ntBASIC3.78□□□□□ -1.8
USP6P35125 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP6P35125 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.78□□□□□ -1.8
USP6P35125 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.77□□□□□ -1.81
USP6P35125 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP6P35125 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.77□□□□□ -1.81
USP6P35125 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.77□□□□□ -1.81
USP6P35125 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP6P35125 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
USP6P35125 SNORD56.4-201ENST00000363883 71 ntBASIC3.77□□□□□ -1.81
USP6P35125 RPL31P1-201ENST00000398116 372 ntBASIC3.77□□□□□ -1.81
USP6P35125 MIR887-201ENST00000401258 79 ntBASIC3.77□□□□□ -1.81
USP6P35125 AL356057.3-201ENST00000402607 340 ntBASIC3.77□□□□□ -1.81
USP6P35125 AL512430.2-201ENST00000406786 339 ntBASIC3.77□□□□□ -1.81
USP6P35125 UBE2V1P11-201ENST00000411559 285 ntBASIC3.77□□□□□ -1.81
USP6P35125 AC008173.1-201ENST00000418901 264 ntBASIC3.77□□□□□ -1.81
USP6P35125 AL512637.2-201ENST00000431287 1256 ntBASIC3.77□□□□□ -1.81
USP6P35125 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.77□□□□□ -1.81
USP6P35125 RPS20P32-201ENST00000456044 356 ntBASIC3.77□□□□□ -1.81
USP6P35125 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.77□□□□□ -1.81
USP6P35125 RPL32P14-201ENST00000463196 378 ntBASIC3.77□□□□□ -1.81
USP6P35125 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.77□□□□□ -1.81
USP6P35125 AC112518.2-201ENST00000508565 425 ntBASIC3.77□□□□□ -1.81
USP6P35125 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.77□□□□□ -1.81
USP6P35125 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.77□□□□□ -1.81
USP6P35125 AP000916.1-201ENST00000533869 835 ntBASIC3.77□□□□□ -1.81
USP6P35125 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.77□□□□□ -1.81
USP6P35125 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.77□□□□□ -1.81
USP6P35125 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.77□□□□□ -1.81
USP6P35125 AC027104.1-201ENST00000563702 681 ntBASIC3.77□□□□□ -1.81
USP6P35125 MIR3908-201ENST00000579798 126 ntBASIC3.77□□□□□ -1.81
USP6P35125 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.77□□□□□ -1.81
USP6P35125 AC120053.1-201ENST00000607706 736 ntBASIC3.77□□□□□ -1.81
USP6P35125 AC008121.2-201ENST00000614647 523 ntBASIC3.77□□□□□ -1.81
USP6P35125 AC073569.3-201ENST00000619055 682 ntBASIC3.77□□□□□ -1.81
USP6P35125 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
USP6P35125 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms