Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC023050.2-201ENST00000544968 387 ntBASIC4.04□□□□□ -1.76
HOXC8P31273 AC091515.1-201ENST00000548110 679 ntBASIC4.04□□□□□ -1.76
HOXC8P31273 DUXAP6-201ENST00000553858 601 ntBASIC4.04□□□□□ -1.76
HOXC8P31273 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXC8P31273 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXC8P31273 AC013444.2-201ENST00000603317 787 ntBASIC4.04□□□□□ -1.76
HOXC8P31273 OR1S1-201ENST00000624470 978 ntBASIC4.04□□□□□ -1.76
HOXC8P31273 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXC8P31273 MFSD8-245ENST00000641743 948 ntBASIC4.04□□□□□ -1.76
HOXC8P31273 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC8P31273 MFSD8-236ENST00000641509 4050 ntBASIC4.04□□□□□ -1.76
HOXC8P31273 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HOXC8P31273 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXC8P31273 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXC8P31273 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXC8P31273 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXC8P31273 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXC8P31273 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HOXC8P31273 AL359893.1-201ENST00000447628 1580 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
HOXC8P31273 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC8P31273 MIR217-201ENST00000384817 110 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 MIR491-201ENST00000384877 84 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 MIR483-201ENST00000385070 76 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 EI24P1-201ENST00000416584 867 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 Z75741.2-201ENST00000417272 1167 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 BOLA3P4-201ENST00000418151 400 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 AL365338.1-201ENST00000422282 858 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 AL158156.1-201ENST00000422509 473 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 AC091390.3-201ENST00000426478 338 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 AC073063.1-201ENST00000434352 607 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC8P31273 Z83846.1-201ENST00000446798 265 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 HMGN2P21-201ENST00000447764 270 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 AL034418.1-201ENST00000448675 860 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC8P31273 AL122001.1-201ENST00000457027 370 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC8P31273 AC078817.1-201ENST00000492623 435 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 AC010486.2-201ENST00000505572 483 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC8P31273 AC034244.1-201ENST00000507687 207 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC8P31273 SNORA3.4-201ENST00000515969 96 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 RNU2-58P-201ENST00000516403 183 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 SUMO2P20-201ENST00000520803 283 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC8P31273 AP004242.1-201ENST00000533701 349 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 AC007834.2-201ENST00000536310 343 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXC8P31273 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC8P31273 AC008088.1-201ENST00000580993 280 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 MIR5195-201ENST00000583555 115 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC8P31273 AC006077.1-201ENST00000604746 343 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 HMGN2P28-201ENST00000606102 262 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC8P31273 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC8P31273 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC8P31273 AC078883.4-201ENST00000623218 367 ntBASIC4.03□□□□□ -1.76
HOXC8P31273 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC8P31273 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
HOXC8P31273 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC8P31273 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC8P31273 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXC8P31273 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC8P31273 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC8P31273 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC8P31273 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXC8P31273 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC8P31273 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC8P31273 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HOXC8P31273 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HOXC8P31273 RNU6-251P-201ENST00000363235 104 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 SNORD116.1-201ENST00000365628 92 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HOXC8P31273 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC8P31273 Y_RNA.493-201ENST00000384422 102 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 HLFP1-201ENST00000402375 499 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 AL160275.2-201ENST00000412010 394 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 ELOCP9-201ENST00000418624 239 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 RPF2P1-201ENST00000424137 906 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 ATP5HP2-201ENST00000433885 485 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC8P31273 RPL7P28-201ENST00000437739 740 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC8P31273 FGF7P5-201ENST00000441829 291 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 MTCO1P48-201ENST00000448024 1096 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 CYCSP35-201ENST00000451978 304 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 AC098824.1-201ENST00000453565 980 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 PNPLA4P1-201ENST00000458328 305 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 SYPL1P1-201ENST00000473622 768 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.02□□□□□ -1.77
HOXC8P31273 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.02□□□□□ -1.77
HOXC8P31273 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.02□□□□□ -1.77
HOXC8P31273 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC8P31273 AC009101.1-201ENST00000568135 242 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms