Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 AC125494.3-201ENST00000602759 455 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 XIAPP1-201ENST00000603162 600 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 AL513477.2-201ENST00000607858 568 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 AC013468.1-201ENST00000608680 598 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 AP001033.2-201ENST00000609701 1003 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 AC107308.1-201ENST00000615897 301 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 STMN1P1-201ENST00000617809 440 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 AL163051.2-201ENST00000618976 735 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 AC083865.1-201ENST00000636634 831 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 AC017104.5-201ENST00000637647 639 ntBASIC2.71□□□□□ -1.98
HLA-DMAP28067 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DMAP28067 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
HLA-DMAP28067 GABRG2-229ENST00000641017 3628 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 ASNSP3-201ENST00000451989 1306 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
HLA-DMAP28067 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DMAP28067 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DMAP28067 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DMAP28067 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DMAP28067 RNU4-35P-201ENST00000362588 141 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 RNU6-761P-201ENST00000384148 107 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
HLA-DMAP28067 FABP12P1-201ENST00000401911 322 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 RNA5SP274-201ENST00000410484 108 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 AL445183.3-201ENST00000414168 502 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 CYCSP4-201ENST00000429682 331 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 PTP4A1P3-201ENST00000433661 420 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 ATP5C1P1-201ENST00000441945 895 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DMAP28067 OR6K1P-201ENST00000456766 971 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 RPL21P41-201ENST00000459863 264 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 RPS29P12-201ENST00000460178 152 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 RPL21P10-201ENST00000463521 490 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 AC008571.1-201ENST00000467232 300 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 ACTR3P3-201ENST00000480448 893 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.7□□□□□ -1.98
HLA-DMAP28067 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DMAP28067 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DMAP28067 AC083923.1-201ENST00000523708 376 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DMAP28067 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DMAP28067 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DMAP28067 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DMAP28067 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.7□□□□□ -1.98
HLA-DMAP28067 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DMAP28067 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DMAP28067 Z99129.2-201ENST00000619967 314 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 AC007275.1-201ENST00000621243 671 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 AL109659.3-201ENST00000624985 950 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
HLA-DMAP28067 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
HLA-DMAP28067 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.7□□□□□ -1.98
HLA-DMAP28067 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DMAP28067 AC233263.6-201ENST00000631132 1963 ntBASIC2.7□□□□□ -1.98
HLA-DMAP28067 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DMAP28067 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
HLA-DMAP28067 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DMAP28067 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 RNU6-1249P-201ENST00000363237 111 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 RNU1-64P-201ENST00000365443 163 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DMAP28067 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 AC092745.2-202ENST00000411880 369 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 AC114973.1-201ENST00000429057 632 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 AC109583.1-201ENST00000432156 268 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DMAP28067 UBE2V1P5-201ENST00000440070 405 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 AL592437.1-201ENST00000443781 492 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 AC009220.1-201ENST00000451614 275 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 RNA5SP310-201ENST00000459084 116 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 RN7SL601P-201ENST00000471221 293 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 RN7SL633P-201ENST00000488974 297 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 MTCO3P44-201ENST00000510977 541 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 AP000857.1-201ENST00000532151 543 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DMAP28067 AL031985.2-201ENST00000600955 480 ntBASIC2.69□□□□□ -1.98
HLA-DMAP28067 AC079880.2-201ENST00000603790 1213 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms