Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
XPAP23025 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
XPAP23025 AC011978.2-201ENST00000569835 2054 ntBASIC4.79□□□□□ -1.64
XPAP23025 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
XPAP23025 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
XPAP23025 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.79□□□□□ -1.64
XPAP23025 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.79□□□□□ -1.64
XPAP23025 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
XPAP23025 AL590240.1-201ENST00000334118 313 ntBASIC4.79□□□□□ -1.64
XPAP23025 RN7SKP115-201ENST00000363177 317 ntBASIC4.79□□□□□ -1.64
XPAP23025 RNY4P14-201ENST00000363656 96 ntBASIC4.79□□□□□ -1.64
XPAP23025 SNORD82-201ENST00000365530 70 ntBASIC4.79□□□□□ -1.64
XPAP23025 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
XPAP23025 RNU6-1103P-201ENST00000384150 107 ntBASIC4.79□□□□□ -1.64
XPAP23025 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
XPAP23025 RN7SKP267-201ENST00000410381 285 ntBASIC4.79□□□□□ -1.64
XPAP23025 AL591848.1-201ENST00000413092 322 ntBASIC4.79□□□□□ -1.64
XPAP23025 MTND3P17-201ENST00000416968 344 ntBASIC4.79□□□□□ -1.64
XPAP23025 MTATP6P27-201ENST00000416987 621 ntBASIC4.79□□□□□ -1.64
XPAP23025 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.79□□□□□ -1.64
XPAP23025 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.79□□□□□ -1.64
XPAP23025 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.79□□□□□ -1.64
XPAP23025 RPL7P15-201ENST00000461190 712 ntBASIC4.79□□□□□ -1.64
XPAP23025 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.79□□□□□ -1.64
XPAP23025 AC034222.1-201ENST00000494052 532 ntBASIC4.79□□□□□ -1.64
XPAP23025 FCF1P3-201ENST00000496394 590 ntBASIC4.79□□□□□ -1.64
XPAP23025 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
XPAP23025 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.79□□□□□ -1.64
XPAP23025 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.79□□□□□ -1.64
XPAP23025 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.79□□□□□ -1.64
XPAP23025 AC092470.1-201ENST00000546187 132 ntBASIC4.79□□□□□ -1.64
XPAP23025 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.79□□□□□ -1.64
XPAP23025 HMGB1P33-201ENST00000563485 527 ntBASIC4.79□□□□□ -1.64
XPAP23025 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.79□□□□□ -1.64
XPAP23025 AC245014.2-201ENST00000603689 287 ntBASIC4.79□□□□□ -1.64
XPAP23025 AC246785.4-201ENST00000605374 287 ntBASIC4.79□□□□□ -1.64
XPAP23025 AP003117.2-201ENST00000606010 545 ntBASIC4.79□□□□□ -1.64
XPAP23025 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.79□□□□□ -1.64
XPAP23025 AC105429.2-201ENST00000610567 517 ntBASIC4.79□□□□□ -1.64
XPAP23025 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.79□□□□□ -1.64
XPAP23025 AC092794.2-201ENST00000620933 563 ntBASIC4.79□□□□□ -1.64
XPAP23025 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.79□□□□□ -1.64
XPAP23025 AC010149.2-201ENST00000637608 315 ntBASIC4.79□□□□□ -1.64
XPAP23025 AC024560.2-201ENST00000507981 1497 ntBASIC4.79□□□□□ -1.64
XPAP23025 AP001642.1-201ENST00000624727 2117 ntBASIC4.79□□□□□ -1.64
XPAP23025 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
XPAP23025 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.78□□□□□ -1.64
XPAP23025 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.78□□□□□ -1.64
XPAP23025 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
XPAP23025 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.78□□□□□ -1.64
XPAP23025 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.78□□□□□ -1.64
XPAP23025 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
XPAP23025 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.78□□□□□ -1.64
XPAP23025 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
XPAP23025 Y_RNA.1-201ENST00000352915 104 ntBASIC4.78□□□□□ -1.64
XPAP23025 AL161781.1-201ENST00000354277 403 ntBASIC4.78□□□□□ -1.64
XPAP23025 Y_RNA.402-201ENST00000383972 102 ntBASIC4.78□□□□□ -1.64
XPAP23025 CYB5AP4-201ENST00000396692 399 ntBASIC4.78□□□□□ -1.64
XPAP23025 Z98745.1-201ENST00000402553 494 ntBASIC4.78□□□□□ -1.64
XPAP23025 AL356421.1-201ENST00000403255 413 ntBASIC4.78□□□□□ -1.64
XPAP23025 RSU1P3-201ENST00000412878 835 ntBASIC4.78□□□□□ -1.64
XPAP23025 FABP7P1-201ENST00000424004 391 ntBASIC4.78□□□□□ -1.64
XPAP23025 AL353777.1-201ENST00000425552 326 ntBASIC4.78□□□□□ -1.64
XPAP23025 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.78□□□□□ -1.64
XPAP23025 AC002486.1-201ENST00000435098 391 ntBASIC4.78□□□□□ -1.64
XPAP23025 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.78□□□□□ -1.64
XPAP23025 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.78□□□□□ -1.64
XPAP23025 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.78□□□□□ -1.64
XPAP23025 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.78□□□□□ -1.64
XPAP23025 AC073264.2-201ENST00000448886 166 ntBASIC4.78□□□□□ -1.64
XPAP23025 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.78□□□□□ -1.64
XPAP23025 AL359385.1-201ENST00000456509 365 ntBASIC4.78□□□□□ -1.64
XPAP23025 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.78□□□□□ -1.64
XPAP23025 AC093267.1-201ENST00000489176 961 ntBASIC4.78□□□□□ -1.64
XPAP23025 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.78□□□□□ -1.64
XPAP23025 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.78□□□□□ -1.64
XPAP23025 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.78□□□□□ -1.64
XPAP23025 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.78□□□□□ -1.64
XPAP23025 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.78□□□□□ -1.64
XPAP23025 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.78□□□□□ -1.64
XPAP23025 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
XPAP23025 AC093249.4-201ENST00000564755 259 ntBASIC4.78□□□□□ -1.64
XPAP23025 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.78□□□□□ -1.64
XPAP23025 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.78□□□□□ -1.64
XPAP23025 RN7SL652P-201ENST00000577769 300 ntBASIC4.78□□□□□ -1.64
XPAP23025 AC053481.3-201ENST00000577881 843 ntBASIC4.78□□□□□ -1.64
XPAP23025 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.78□□□□□ -1.64
XPAP23025 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.78□□□□□ -1.64
XPAP23025 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.78□□□□□ -1.64
XPAP23025 AC008782.1-201ENST00000603386 430 ntBASIC4.78□□□□□ -1.64
XPAP23025 RPL23AP92-201ENST00000603609 255 ntBASIC4.78□□□□□ -1.64
XPAP23025 AC025588.3-201ENST00000604182 274 ntBASIC4.78□□□□□ -1.64
XPAP23025 AL355472.4-201ENST00000610233 626 ntBASIC4.78□□□□□ -1.64
XPAP23025 AC002553.4-201ENST00000616896 331 ntBASIC4.78□□□□□ -1.64
XPAP23025 AC006338.1-201ENST00000618453 749 ntBASIC4.78□□□□□ -1.64
XPAP23025 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
XPAP23025 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
XPAP23025 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
XPAP23025 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
XPAP23025 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms