Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.57□□□□□ -1.84
SNX3O60493 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX3O60493 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX3O60493 AC104027.1-201ENST00000521887 300 ntBASIC3.57□□□□□ -1.84
SNX3O60493 AC022695.1-201ENST00000522089 237 ntBASIC3.57□□□□□ -1.84
SNX3O60493 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.57□□□□□ -1.84
SNX3O60493 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.57□□□□□ -1.84
SNX3O60493 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.57□□□□□ -1.84
SNX3O60493 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
SNX3O60493 CYCSP2-201ENST00000558168 301 ntBASIC3.57□□□□□ -1.84
SNX3O60493 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX3O60493 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX3O60493 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX3O60493 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.57□□□□□ -1.84
SNX3O60493 AL079343.1-201ENST00000572358 1771 ntBASIC3.57□□□□□ -1.84
SNX3O60493 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX3O60493 RN7SL600P-201ENST00000581811 299 ntBASIC3.57□□□□□ -1.84
SNX3O60493 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
SNX3O60493 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.57□□□□□ -1.84
SNX3O60493 AL355812.1-201ENST00000603215 216 ntBASIC3.57□□□□□ -1.84
SNX3O60493 RPL23AP92-201ENST00000603609 255 ntBASIC3.57□□□□□ -1.84
SNX3O60493 DPRXP5-201ENST00000604662 539 ntBASIC3.57□□□□□ -1.84
SNX3O60493 AC112220.3-201ENST00000605502 502 ntBASIC3.57□□□□□ -1.84
SNX3O60493 AC092653.1-201ENST00000608509 531 ntBASIC3.57□□□□□ -1.84
SNX3O60493 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX3O60493 AC005962.2-201ENST00000611427 652 ntBASIC3.57□□□□□ -1.84
SNX3O60493 AC025588.4-201ENST00000615802 908 ntBASIC3.57□□□□□ -1.84
SNX3O60493 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SNX3O60493 AL732618.1-201ENST00000623251 301 ntBASIC3.57□□□□□ -1.84
SNX3O60493 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SNX3O60493 AC007490.1-201ENST00000624321 703 ntBASIC3.57□□□□□ -1.84
SNX3O60493 CR381572.1-201ENST00000625098 102 ntBASIC3.57□□□□□ -1.84
SNX3O60493 MIR3653-201ENST00000625572 110 ntBASIC3.57□□□□□ -1.84
SNX3O60493 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX3O60493 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SNX3O60493 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SNX3O60493 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNX3O60493 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.56□□□□□ -1.84
SNX3O60493 AC004972.1-201ENST00000623934 2209 ntBASIC3.56□□□□□ -1.84
SNX3O60493 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNX3O60493 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SNX3O60493 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SNX3O60493 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNX3O60493 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX3O60493 ZNF542P-204ENST00000482727 1305 ntBASIC3.56□□□□□ -1.84
SNX3O60493 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNX3O60493 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNX3O60493 AC007685.1-201ENST00000329806 452 ntBASIC3.56□□□□□ -1.84
SNX3O60493 RNA5SP447-201ENST00000363749 119 ntBASIC3.56□□□□□ -1.84
SNX3O60493 RN7SKP103-201ENST00000363848 320 ntBASIC3.56□□□□□ -1.84
SNX3O60493 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
SNX3O60493 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNX3O60493 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SNX3O60493 EI24P2-201ENST00000397776 1076 ntBASIC3.56□□□□□ -1.84
SNX3O60493 AC119751.3-201ENST00000399720 670 ntBASIC3.56□□□□□ -1.84
SNX3O60493 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SNX3O60493 AL121972.1-201ENST00000402023 252 ntBASIC3.56□□□□□ -1.84
SNX3O60493 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX3O60493 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SNX3O60493 AL139128.1-201ENST00000413921 941 ntBASIC3.56□□□□□ -1.84
SNX3O60493 MTCYBP38-201ENST00000417160 1123 ntBASIC3.56□□□□□ -1.84
SNX3O60493 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.56□□□□□ -1.84
SNX3O60493 AIMP1P1-201ENST00000418670 937 ntBASIC3.56□□□□□ -1.84
SNX3O60493 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX3O60493 AL513174.1-201ENST00000423182 629 ntBASIC3.56□□□□□ -1.84
SNX3O60493 AL691449.1-201ENST00000426570 421 ntBASIC3.56□□□□□ -1.84
SNX3O60493 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX3O60493 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX3O60493 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX3O60493 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX3O60493 AC005297.2-201ENST00000450430 606 ntBASIC3.56□□□□□ -1.84
SNX3O60493 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX3O60493 BTF3P5-201ENST00000457252 467 ntBASIC3.56□□□□□ -1.84
SNX3O60493 HMGB3P30-201ENST00000457863 606 ntBASIC3.56□□□□□ -1.84
SNX3O60493 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX3O60493 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX3O60493 RPL35AP28-201ENST00000459730 331 ntBASIC3.56□□□□□ -1.84
SNX3O60493 AP000873.1-201ENST00000463987 400 ntBASIC3.56□□□□□ -1.84
SNX3O60493 RN7SL330P-201ENST00000469709 307 ntBASIC3.56□□□□□ -1.84
SNX3O60493 RN7SL303P-201ENST00000469773 251 ntBASIC3.56□□□□□ -1.84
SNX3O60493 AC090453.1-201ENST00000495560 436 ntBASIC3.56□□□□□ -1.84
SNX3O60493 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX3O60493 AC093281.2-201ENST00000510153 597 ntBASIC3.56□□□□□ -1.84
SNX3O60493 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.56□□□□□ -1.84
SNX3O60493 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SNX3O60493 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX3O60493 SNORA3.4-201ENST00000515969 96 ntBASIC3.56□□□□□ -1.84
SNX3O60493 RNU6-27P-201ENST00000516146 107 ntBASIC3.56□□□□□ -1.84
SNX3O60493 RNU2-27P-201ENST00000516185 142 ntBASIC3.56□□□□□ -1.84
SNX3O60493 AC026407.1-201ENST00000518369 204 ntBASIC3.56□□□□□ -1.84
SNX3O60493 AC068657.1-201ENST00000520807 306 ntBASIC3.56□□□□□ -1.84
SNX3O60493 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.56□□□□□ -1.84
SNX3O60493 HSPA8P13-201ENST00000523715 472 ntBASIC3.56□□□□□ -1.84
SNX3O60493 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX3O60493 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.56□□□□□ -1.84
SNX3O60493 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.56□□□□□ -1.84
SNX3O60493 AC009094.1-201ENST00000564443 426 ntBASIC3.56□□□□□ -1.84
SNX3O60493 AC090616.5-202ENST00000582111 297 ntBASIC3.56□□□□□ -1.84
SNX3O60493 MIR3138-201ENST00000585238 82 ntBASIC3.56□□□□□ -1.84
SNX3O60493 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms