Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC2.51□□□□□ -2.01
SSNA1O43805 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
SSNA1O43805 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SSNA1O43805 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SSNA1O43805 AC080100.1-201ENST00000624239 5356 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 AC111188.2-201ENST00000529697 1387 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SSNA1O43805 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SSNA1O43805 MIR372-201ENST00000362225 67 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 RNU1-35P-201ENST00000362782 153 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.5□□□□□ -2.01
SSNA1O43805 SNORA70C-201ENST00000384538 135 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 MIR493-201ENST00000385254 89 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.5□□□□□ -2.01
SSNA1O43805 CYB5AP4-201ENST00000396692 399 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.5□□□□□ -2.01
SSNA1O43805 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.5□□□□□ -2.01
SSNA1O43805 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.5□□□□□ -2.01
SSNA1O43805 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.5□□□□□ -2.01
SSNA1O43805 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.5□□□□□ -2.01
SSNA1O43805 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.5□□□□□ -2.01
SSNA1O43805 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.5□□□□□ -2.01
SSNA1O43805 CYCSP35-201ENST00000451978 304 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 RN7SL385P-201ENST00000468873 276 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 AC090525.1-201ENST00000479116 478 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 RPL21P131-201ENST00000497298 483 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 MLLT10P2-201ENST00000506434 249 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.5□□□□□ -2.01
SSNA1O43805 AC009901.1-201ENST00000506703 541 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.5□□□□□ -2.01
SSNA1O43805 MTND5P4-201ENST00000514978 288 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 AC087373.1-201ENST00000524920 491 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 AP001804.3-201ENST00000525146 880 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SSNA1O43805 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.5□□□□□ -2.01
SSNA1O43805 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.5□□□□□ -2.01
SSNA1O43805 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SSNA1O43805 AC012414.2-201ENST00000559474 187 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 AC090695.1-201ENST00000561269 1222 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.5□□□□□ -2.01
SSNA1O43805 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.5□□□□□ -2.01
SSNA1O43805 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.5□□□□□ -2.01
SSNA1O43805 AC073657.2-201ENST00000605661 303 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.5□□□□□ -2.01
SSNA1O43805 AC021851.1-201ENST00000608537 1082 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 AC090912.3-201ENST00000609775 533 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 AC006329.2-201ENST00000611491 394 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SSNA1O43805 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.5□□□□□ -2.01
SSNA1O43805 AC002064.3-201ENST00000623448 346 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.5□□□□□ -2.01
SSNA1O43805 WDR75-207ENST00000631047 270 ntTSL 5 BASIC2.5□□□□□ -2.01
SSNA1O43805 AC012618.3-205ENST00000637896 1496 ntBASIC2.5□□□□□ -2.01
SSNA1O43805 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
SSNA1O43805 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SSNA1O43805 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC2.5□□□□□ -2.01
SSNA1O43805 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SSNA1O43805 AC090740.1-201ENST00000623193 2262 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.49□□□□□ -2.01
SSNA1O43805 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SSNA1O43805 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SSNA1O43805 VTRNA1-1-201ENST00000363120 99 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 RNU6-252P-201ENST00000363232 107 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.49□□□□□ -2.01
SSNA1O43805 SNORD21-201ENST00000383953 95 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 RNU6-730P-201ENST00000383954 104 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 MIR592-201ENST00000384959 97 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 AL356057.2-201ENST00000403318 432 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 RPL7P25-201ENST00000404151 721 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.49□□□□□ -2.01
SSNA1O43805 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.49□□□□□ -2.01
SSNA1O43805 RPP40P1-201ENST00000426762 456 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.49□□□□□ -2.01
SSNA1O43805 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 AC011242.1-201ENST00000433596 1158 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.49□□□□□ -2.01
SSNA1O43805 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SSNA1O43805 CEACAMP9-201ENST00000442990 513 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 AC114755.5-201ENST00000447760 831 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC2.49□□□□□ -2.01
SSNA1O43805 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.49□□□□□ -2.01
SSNA1O43805 AL359385.1-201ENST00000456509 365 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 RPS4XP6-201ENST00000477670 797 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.49□□□□□ -2.01
SSNA1O43805 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.49□□□□□ -2.01
SSNA1O43805 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.49□□□□□ -2.01
SSNA1O43805 SNORA9.3-201ENST00000516383 129 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.49□□□□□ -2.01
SSNA1O43805 FAM60DP-201ENST00000524174 632 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 OR10V3P-201ENST00000525712 725 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.49□□□□□ -2.01
SSNA1O43805 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.49□□□□□ -2.01
SSNA1O43805 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.49□□□□□ -2.01
SSNA1O43805 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.49□□□□□ -2.01
SSNA1O43805 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.49□□□□□ -2.01
SSNA1O43805 AL356575.1-201ENST00000603008 283 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 AC012669.1-201ENST00000603209 283 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 PRELID3BP8-201ENST00000604148 295 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms