Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC007275.1-201ENST00000621243 671 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL590240.3-201ENST00000621416 943 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL138955.1-201ENST00000622881 1040 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC063979.1-201ENST00000415539 377 ntBASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 RPL7P29-201ENST00000437151 728 ntBASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC000041.1-201ENST00000439655 175 ntBASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC011037.1-201ENST00000483964 558 ntBASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC108860.1-201ENST00000484521 383 ntBASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 HMGB1P38-201ENST00000490557 577 ntBASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC112518.2-201ENST00000508565 425 ntBASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC083923.1-201ENST00000523708 376 ntBASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 OR5D17P-201ENST00000531492 978 ntBASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL137843.1-201ENST00000605078 385 ntBASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 MIR6852-201ENST00000621699 66 ntBASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL391262.2-201ENST00000622466 494 ntBASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC006386.2-201ENST00000624491 75 ntBASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC012005.1-201ENST00000624575 75 ntBASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 MTCO1P18-201ENST00000455518 1419 ntBASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC000403.1-201ENST00000613696 3585 ntBASIC3.1□□□□□ -1.91
TMX2-CTNND1H3BSU7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 OR5H2-201ENST00000355273 945 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 RNA5SP27-201ENST00000363839 119 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 RNU6-468P-201ENST00000384003 109 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 RNU6-317P-201ENST00000384031 107 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 SNORA7.4-201ENST00000384249 137 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC008173.1-201ENST00000418901 264 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC009965.2-201ENST00000425328 970 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 RPS7P2-201ENST00000435134 607 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 MTND2P8-201ENST00000450555 1025 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 GTF2IP12-201ENST00000456547 356 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AP001207.2-201ENST00000519490 539 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC024224.1-201ENST00000538284 609 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC104072.1-201ENST00000568817 668 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC006116.7-201ENST00000590141 756 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC067852.4-201ENST00000590314 478 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC068620.3-201ENST00000602749 560 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 MIR7106-201ENST00000612419 65 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC008759.3-201ENST00000613300 508 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC078880.5-201ENST00000617845 421 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC073569.3-201ENST00000619055 682 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC022306.3-201ENST00000619930 550 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 DCAF13P1-201ENST00000495256 1330 ntBASIC3.09□□□□□ -1.91
TMX2-CTNND1H3BSU7 XPOTP1-201ENST00000443317 2398 ntBASIC3.09□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC117529.2-201ENST00000512159 2068 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 ENSAP3-201ENST00000312710 333 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 RNA5SP189-201ENST00000364920 115 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 MIR92A2-201ENST00000385299 75 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 SNORD65C-201ENST00000390962 71 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC069282.1-201ENST00000411911 526 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 RPL31P2-201ENST00000413849 377 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 RPL35AP12-201ENST00000425362 338 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms