Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AC011978.2-201ENST00000569835 2054 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AL133264.1-201ENST00000407157 562 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AL136133.1-201ENST00000413694 376 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 RPL30P2-201ENST00000414021 291 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 LUZP4P1-201ENST00000415420 344 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AL356320.2-201ENST00000417263 507 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 BOLA3P4-201ENST00000418151 400 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 RPS3AP37-201ENST00000419176 745 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 RPL7P44-201ENST00000424827 742 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 ELOCP6-201ENST00000429066 328 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AC005345.1-201ENST00000431868 217 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AC093155.1-201ENST00000440164 826 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 Z77249.1-201ENST00000444622 1175 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 ZNF886P-201ENST00000450781 723 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 MTCO3P20-201ENST00000454926 688 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 ELOCP12-201ENST00000458706 328 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 snoU13.24-201ENST00000458998 104 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AC087879.1-201ENST00000474343 374 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AL049830.2-201ENST00000480072 201 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 VPS26AP1-201ENST00000483197 979 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AC010460.2-201ENST00000509054 677 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AC113347.3-201ENST00000509113 148 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 MIR4458-201ENST00000578872 75 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 SNORD39.3-201ENST00000584451 71 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AC006557.5-201ENST00000603126 811 ntBASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
NEDD8-MDP1E9PL57 ELL2P4-201ENST00000446870 1376 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 DBF4P1-201ENST00000412976 1892 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 SUGT1P1-201ENST00000379514 476 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 RNU6-921P-201ENST00000384361 107 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 RNU6-1300P-201ENST00000391046 108 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 RNU6-1242P-201ENST00000391052 103 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AL121978.1-201ENST00000402778 359 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AL513175.2-201ENST00000422071 443 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 MTND2P5-201ENST00000432656 1006 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 SEPT7P5-201ENST00000434048 306 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 USP9YP24-201ENST00000434374 697 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 USP9YP17-201ENST00000444617 696 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 BX276092.4-201ENST00000452056 248 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 PTGES3P5-201ENST00000455109 434 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 RN7SL807P-201ENST00000470923 297 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 RN7SKP234-201ENST00000517173 224 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AP001317.1-201ENST00000531194 960 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 DUXAP6-201ENST00000553858 601 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AC074051.3-201ENST00000570238 358 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 MIR4276-201ENST00000584832 70 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AL391001.1-201ENST00000602747 715 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 MTND3P19-201ENST00000603825 345 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AC026790.2-201ENST00000606282 430 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AC023158.2-201ENST00000614876 543 ntBASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.52□□□□□ -1.85
NEDD8-MDP1E9PL57 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms