Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 MTCO1P12-201ENST00000414273 1543 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 RNA5SP258-201ENST00000362750 119 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 RNU6-657P-201ENST00000383904 107 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 MIR218-2-201ENST00000385006 110 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 RNA5SP424-201ENST00000390988 115 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 RNU6-821P-201ENST00000390995 107 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 ATP5F1P4-201ENST00000397288 746 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 RPL23AP47-201ENST00000408017 460 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 AC013410.2-201ENST00000422627 201 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 SNORA71B-202ENST00000439232 272 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 EXOSC3P1-201ENST00000448649 500 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 snoU13.24-201ENST00000458998 104 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 RPL23AP14-201ENST00000468281 468 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 PABPC1P3-201ENST00000469174 459 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 AC010285.1-201ENST00000470580 392 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 AC013828.1-201ENST00000481845 158 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 BOLA3P3-201ENST00000505182 232 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 RNA5SP208-201ENST00000516156 78 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 AL121766.1-201ENST00000547436 487 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 MTCYBP23-201ENST00000558717 1102 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 AC006960.3-201ENST00000561845 705 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 MTND3P13-201ENST00000574391 343 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 SRGNP1-201ENST00000603392 451 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 SNORA62.6-201ENST00000606322 83 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 SNORA50A-202ENST00000629536 136 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 AC026634.1-201ENST00000634369 198 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 AC119674.1-207ENST00000641355 633 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 LINC00561-201ENST00000565815 2738 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 ZNF542P-204ENST00000482727 1305 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 AC005183.1-201ENST00000603687 1979 ntBASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 AC004925.1-201ENST00000624256 2706 ntBASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 AP005901.5-201ENST00000545779 1796 ntBASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 snoZ40.1-201ENST00000364540 72 ntBASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 RNA5SP235-201ENST00000365411 114 ntBASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 Y_RNA.472-201ENST00000384322 102 ntBASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 HMGN2P8-201ENST00000391458 268 ntBASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 HSPE1P8-201ENST00000406997 288 ntBASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 RAD23BP2-201ENST00000416003 1207 ntBASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 MTCO3P12-201ENST00000416718 547 ntBASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 AC127537.2-201ENST00000439258 465 ntBASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 HMGB3P6-201ENST00000444896 598 ntBASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 AC112492.1-201ENST00000449607 712 ntBASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 MTCO3P35-201ENST00000485582 781 ntBASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 SNORA31.20-201ENST00000517111 133 ntBASIC3.35□□□□□ -1.87
NPIPA2E9PIF3 NARSP2-201ENST00000518524 679 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms