Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL445687.2-201ENST00000458156 728 ntBASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 AC114801.2-201ENST00000503825 781 ntBASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 AC018552.1-201ENST00000562099 811 ntBASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 SUB1P3-201ENST00000564581 315 ntBASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 AC078899.3-201ENST00000599065 212 ntBASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 AL355810.1-201ENST00000614629 552 ntBASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 AL512652.1-201ENST00000619006 500 ntBASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 AL137067.2-201ENST00000621202 131 ntBASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AC233263.6-201ENST00000631132 1963 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 SNORA21-201ENST00000362423 132 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 RNU6-1059P-201ENST00000363752 98 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 RNU1-59P-201ENST00000364829 162 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 Y_RNA.461-201ENST00000384263 103 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AL121835.1-201ENST00000404250 354 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 RNU4-65P-201ENST00000410473 140 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 RNA5SP111-201ENST00000411386 101 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 PSMA2P3-201ENST00000429685 675 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 GAPDHP27-201ENST00000447427 1020 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AC008481.1-201ENST00000463278 396 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AP000889.1-201ENST00000530968 660 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AC125232.2-201ENST00000592457 143 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AC007566.2-201ENST00000603642 413 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AC013244.1-201ENST00000604279 193 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 U1.25-201ENST00000614085 162 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 MIR6886-201ENST00000619864 61 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AL137141.1-201ENST00000624622 4836 ntBASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
PCDHB11Q9Y5F2 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 SOCS5P3-201ENST00000425115 1576 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 RPL23AP17-201ENST00000401064 499 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 RN7SKP151-201ENST00000410230 316 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 RN7SKP126-201ENST00000411143 300 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 NME1P1-201ENST00000420914 382 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AC097713.2-201ENST00000430199 356 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AL591704.1-201ENST00000432574 275 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AC011816.1-201ENST00000441346 546 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AC073910.1-201ENST00000445047 438 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms