Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 AC233263.6-201ENST00000631132 1963 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 GNG5P1-201ENST00000255500 204 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 RNA5SP374-201ENST00000362939 125 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 OR52E6-202ENST00000379946 954 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 MIR491-201ENST00000384877 84 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 MIR483-201ENST00000385070 76 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 EIF5P1-201ENST00000400019 1231 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 RNA5SP181-201ENST00000410246 98 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 RNA5SP21-201ENST00000410917 96 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 RPS3AP25-201ENST00000411660 793 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 AC005517.2-201ENST00000424673 553 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 RPL23AP83-201ENST00000434984 473 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 BX510359.1-201ENST00000456973 237 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 RPS29P26-201ENST00000477483 171 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 RPL37P25-201ENST00000507308 276 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 AC108471.1-201ENST00000513977 287 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 RNA5SP402-201ENST00000517148 110 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 AC005412.1-201ENST00000580812 1049 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 TPMTP1-201ENST00000592307 737 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 RPL23AP78-201ENST00000599928 470 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 BDH2P1-201ENST00000602288 736 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 YPEL5P2-201ENST00000605553 359 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 AC011890.2-201ENST00000613393 294 ntBASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.82□□□□□ -2.12
UBE2D4Q9Y2X8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 RPS3AP26-201ENST00000398259 784 ntBASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 AL138827.1-201ENST00000402666 306 ntBASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 MIR1289-1-201ENST00000408836 144 ntBASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 EEF1A1P41-201ENST00000414667 207 ntBASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 AL512649.1-201ENST00000428997 581 ntBASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 SUMO1P4-201ENST00000429430 302 ntBASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 AL139132.1-201ENST00000431587 344 ntBASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 AC011816.1-201ENST00000441346 546 ntBASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 OR51B8P-201ENST00000449892 769 ntBASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 AC104472.2-201ENST00000469035 601 ntBASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 RNA5SP367-201ENST00000516557 118 ntBASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 AC010306.1-201ENST00000523223 1117 ntBASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 AP003072.4-201ENST00000624580 310 ntBASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
UBE2D4Q9Y2X8 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 ANAPC10P1-201ENST00000395991 556 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 SEPT7P2-202ENST00000398921 823 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 TRGV6-201ENST00000417928 299 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 AL645937.1-202ENST00000421799 937 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 AJ239321.1-201ENST00000424255 564 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 OR7L1P-201ENST00000456181 380 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 HNRNPDLP3-201ENST00000456745 380 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 NCOR1P1-202ENST00000486162 291 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 RPL7L1P13-201ENST00000511702 739 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 AC010374.2-201ENST00000512933 535 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 RN7SKP82-201ENST00000516786 223 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 OR5BN1P-201ENST00000532955 829 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 AL121603.1-201ENST00000553815 142 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 GTF2IP8-201ENST00000560687 584 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 MIR5194-201ENST00000582634 120 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 AC017100.2-201ENST00000584628 355 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 AC012468.1-201ENST00000604888 430 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 AC019159.1-201ENST00000605094 187 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 AC140725.3-201ENST00000616193 880 ntBASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms