Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 OR2AS2P-201ENST00000606902 342 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AC106028.5-201ENST00000610332 395 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 MIR6716-201ENST00000613413 80 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AL445567.2-201ENST00000618935 498 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AC008013.2-202ENST00000637965 364 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC105074.1-201ENST00000623380 3095 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 RNU5F-7P-201ENST00000363696 115 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 SNORA70.2-201ENST00000364506 135 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AL583834.1-201ENST00000406943 343 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 RN7SKP177-201ENST00000410567 355 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 FTH1P6-201ENST00000430768 320 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 USP9YP7-201ENST00000436723 430 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 MTND1P30-201ENST00000441241 901 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 RPL36AP33-201ENST00000450395 310 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 USP9YP32-201ENST00000452432 430 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AL445669.2-201ENST00000454425 421 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 ST13P14-201ENST00000474095 734 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AP000926.1-201ENST00000479573 241 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 RPS29P19-201ENST00000479709 171 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC106872.3-201ENST00000495104 446 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 POU5F1P7-201ENST00000508759 541 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC093677.1-201ENST00000514414 678 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC090281.1-201ENST00000523019 276 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC006064.5-201ENST00000541782 248 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AL121766.1-201ENST00000547436 487 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC023161.2-201ENST00000551218 780 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AL109766.1-201ENST00000555080 552 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 PARP1P2-201ENST00000556806 195 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 ROCK1P1-201ENST00000573767 549 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AP001004.1-201ENST00000582468 324 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC055876.5-201ENST00000605667 259 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 AC026422.1-201ENST00000623961 452 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 FAM91A3P-201ENST00000456826 2544 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 CR381670.1-201ENST00000624291 1693 ntBASIC4.03□□□□□ -1.76
HCN3Q9P1Z3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
HCN3Q9P1Z3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
HCN3Q9P1Z3 LARP1BP1-201ENST00000506036 1359 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 OR11H5P-202ENST00000641612 1325 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AC067945.1-201ENST00000342609 618 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AL161781.1-201ENST00000354277 403 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 RNU6-744P-201ENST00000365557 107 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 RNU6-1316P-201ENST00000384242 108 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 MIR513A2-201ENST00000385249 127 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 MIR708-201ENST00000390708 88 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 RNA5SP39-201ENST00000411245 120 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 TPMTP3-201ENST00000411928 735 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 RPL7P8-201ENST00000411964 730 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AL161631.1-201ENST00000417933 486 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AC244098.2-201ENST00000422068 99 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms