Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC016712.1-201ENST00000431088 378 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AC010655.1-201ENST00000449336 292 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 RPL5P24-201ENST00000463742 885 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 MTND1P16-201ENST00000465177 898 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AC011276.1-201ENST00000469688 323 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 SETP14-201ENST00000497538 873 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 WBP1LP4-201ENST00000505043 344 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AC079395.1-201ENST00000510981 262 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 RNU6-1129P-201ENST00000515964 104 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AP001189.2-201ENST00000527320 189 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AC087465.1-201ENST00000560574 245 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 BNIP3P24-201ENST00000593398 557 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AL020997.2-201ENST00000602607 184 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AC243756.2-201ENST00000618406 463 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AP000553.6-201ENST00000641242 118 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NDE1Q9NXR1 AC138915.3-201ENST00000562908 1389 ntBASIC3.51□□□□□ -1.85
NDE1Q9NXR1 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC107081.3-201ENST00000612715 2034 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 RNU6-657P-201ENST00000383904 107 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 RNU6-444P-201ENST00000383988 108 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 DSTNP4-201ENST00000399472 474 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AL049545.1-201ENST00000401856 572 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 TMSB4XP8-201ENST00000402089 135 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 HSPE1P26-201ENST00000405341 275 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 U3.39-201ENST00000408569 239 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 SNORA11-201ENST00000408789 128 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC068533.2-201ENST00000411872 306 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 TMSB4XP6-201ENST00000415187 135 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 MTND2P18-201ENST00000419962 1030 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 MTCO3P1-205ENST00000422088 832 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 TMSB4XP1-201ENST00000424567 135 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC068287.1-201ENST00000430283 295 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AL513175.1-201ENST00000431492 780 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 TBCAP1-201ENST00000436520 327 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 HMGN2P21-201ENST00000447764 270 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AL133217.1-201ENST00000450980 425 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 GAPDHP36-201ENST00000480688 918 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 MRPS33P3-201ENST00000513456 322 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 RNY4P37-201ENST00000516225 96 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AP006245.1-201ENST00000522549 120 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC074050.1-201ENST00000563247 211 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC093519.1-201ENST00000566109 298 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC005412.1-201ENST00000580812 1049 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC008088.1-201ENST00000580993 280 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NDE1Q9NXR1 AC008745.1-201ENST00000604064 271 ntBASIC3.5□□□□□ -1.85
NDE1Q9NXR1 DPRXP5-201ENST00000604662 539 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms