Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RNU2-71P-201ENST00000411395 189 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 Z92545.1-201ENST00000411782 234 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AC005019.1-201ENST00000436455 431 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 HMGN2P20-201ENST00000437531 273 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 PTGES3P5-201ENST00000455109 434 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 HMGN2P16-201ENST00000456802 261 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 MTND2P39-201ENST00000457230 764 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 U3.44-201ENST00000458938 192 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 GAPDHP39-201ENST00000481866 979 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 SUMO2P5-201ENST00000506790 245 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 RNA5SP135-201ENST00000517019 125 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AC087897.1-201ENST00000550134 156 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AL121576.1-201ENST00000556055 276 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AC044913.1-201ENST00000557200 430 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AC011471.1-201ENST00000585766 187 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 SNRPGP15-201ENST00000600149 222 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AC005000.2-201ENST00000605468 310 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AL732618.1-201ENST00000623251 301 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AL359893.1-201ENST00000447628 1580 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 ZNF826P-207ENST00000622273 1910 ntBASIC3.66□□□□□ -1.82
HPS4Q9NQG7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
HPS4Q9NQG7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.65□□□□□ -1.82
HPS4Q9NQG7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.65□□□□□ -1.82
HPS4Q9NQG7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HPS4Q9NQG7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HPS4Q9NQG7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 RNU6-582P-201ENST00000362989 107 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 SNORD116-23-201ENST00000384645 92 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 MIR649-201ENST00000384843 97 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 RNU6-1000P-201ENST00000391066 106 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 TMSB4XP8-201ENST00000402089 135 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AL121978.1-201ENST00000402778 359 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AL139098.1-201ENST00000407291 389 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 BTF3P8-201ENST00000414577 526 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 TMSB4XP6-201ENST00000415187 135 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 TMSB4XP1-201ENST00000424567 135 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 SDCBPP2-201ENST00000424643 885 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 MTCYBP32-201ENST00000427945 1084 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AL591503.2-201ENST00000442314 1005 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 NDUFA5P7-201ENST00000452914 242 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AC099563.1-201ENST00000456086 418 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 MTND3P3-201ENST00000505004 126 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AC008837.1-201ENST00000511513 412 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AC010265.1-201ENST00000513509 211 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AC023632.1-201ENST00000518463 375 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 IGKV2D-36-201ENST00000518643 226 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AC092470.1-201ENST00000546187 132 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AC092953.2-201ENST00000608000 699 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AC018645.2-201ENST00000609151 472 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 RNU6-1192P-201ENST00000612197 107 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 RNVU1-4-201ENST00000612985 164 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 RNU6-489P-201ENST00000618289 107 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AC010872.1-201ENST00000624225 675 ntBASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HPS4Q9NQG7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
HPS4Q9NQG7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HPS4Q9NQG7 RNU6-115P-201ENST00000364310 107 ntBASIC3.64□□□□□ -1.83
HPS4Q9NQG7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HPS4Q9NQG7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HPS4Q9NQG7 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.64□□□□□ -1.83
HPS4Q9NQG7 AL355143.1-201ENST00000407101 841 ntBASIC3.64□□□□□ -1.83
HPS4Q9NQG7 MIR1250-201ENST00000408098 113 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms