Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AC108043.1-201ENST00000512696 574 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 PRELID3BP4-201ENST00000515476 571 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 SNORD59.2-201ENST00000516873 68 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 RNU6-711P-201ENST00000517255 106 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AP000790.1-201ENST00000528891 737 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 GTF2IP22-201ENST00000554443 182 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 MIR4506-201ENST00000584693 77 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AC006130.2-201ENST00000586202 326 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AL591516.1-201ENST00000611326 274 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AC073968.1-201ENST00000618594 637 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AC018755.4-201ENST00000619715 454 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AL161637.1-201ENST00000622380 412 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AP006248.3-201ENST00000623580 594 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 MTND2P41-201ENST00000637599 773 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 AL356274.2-201ENST00000624379 3752 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 RNVU1-3-201ENST00000364313 161 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 RNU6-619P-201ENST00000365146 108 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 RNU6-821P-201ENST00000390995 107 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 PTMAP2-201ENST00000397627 327 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 RPS3AP26-201ENST00000398259 784 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 RPS29P4-201ENST00000414733 161 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 DBIP2-201ENST00000419076 262 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 AC012498.1-201ENST00000424037 437 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 TRIM60P18-201ENST00000441518 828 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 RPL7P59-201ENST00000447700 943 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 AC115115.1-201ENST00000449927 248 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 GTF2IP12-201ENST00000456547 356 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 AC091179.1-201ENST00000461606 579 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 RN7SL75P-201ENST00000461926 281 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 AC105914.1-201ENST00000511798 226 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 AP001207.2-201ENST00000519490 539 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 AC103843.2-201ENST00000530523 682 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 AC133794.1-201ENST00000602731 914 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 AC092474.3-201ENST00000603022 568 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 AL590240.3-201ENST00000621416 943 ntBASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCNB1IP1Q9NPC3 AC244517.1-201ENST00000606030 2086 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 AC093831.2-201ENST00000624393 3427 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 AL353743.1-202ENST00000431724 1695 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 SGO1P1-201ENST00000603525 1447 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 SNORA46-201ENST00000384762 135 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 MIR134-201ENST00000385258 73 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 MIR16-1-201ENST00000385271 89 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 SNORD65C-201ENST00000390962 71 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 AC109780.2-201ENST00000413467 845 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 BX842559.1-201ENST00000419615 532 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 CYCSP4-201ENST00000429682 331 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 MTND2P30-201ENST00000456663 382 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 AC089999.1-201ENST00000460336 374 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 RPS4XP6-201ENST00000477670 797 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 OR52A4P-202ENST00000481634 799 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 AC106707.2-201ENST00000484182 374 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 AC112198.1-201ENST00000505369 1220 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 MTCYBP37-201ENST00000510642 1133 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 AC079791.1-201ENST00000605356 973 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 MAPK10-322ENST00000641485 4530 ntBASIC3.05□□□□□ -1.92
CCNB1IP1Q9NPC3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms