Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 RNA5SP197-201ENST00000363357 119 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 SNORA5B-201ENST00000363786 132 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 ARF4P3-201ENST00000397387 509 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AL121978.1-201ENST00000402778 359 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 RNA5SP104-201ENST00000410989 118 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 JKAMPP1-201ENST00000413804 919 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 MTCO2P17-201ENST00000424336 677 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 RWDD4P2-201ENST00000426392 563 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 PTENP1-201ENST00000447117 1215 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AC133473.1-201ENST00000455173 299 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 NF1P3-201ENST00000457709 450 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 RPS26P15-201ENST00000488067 348 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AC090071.1-201ENST00000507713 644 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AC015688.2-201ENST00000584523 262 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 MRPS35P3-201ENST00000603189 709 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AC024257.5-201ENST00000612739 531 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AL121895.2-201ENST00000619558 447 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AC013470.4-201ENST00000619978 986 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 AP005901.5-201ENST00000545779 1796 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 MTCO1P24-201ENST00000515438 1558 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 MTCO3P31-201ENST00000405526 789 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AL139098.1-201ENST00000407291 389 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AC073264.1-201ENST00000411508 416 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AC007435.1-201ENST00000421086 415 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 MRPS36P1-201ENST00000421291 307 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AL353678.1-201ENST00000422735 741 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AC107083.1-201ENST00000439643 279 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 COX6CP18-201ENST00000448769 222 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 RPL7P31-201ENST00000450192 724 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 OFD1P3Y-201ENST00000453312 783 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 PNPLA4P1-201ENST00000458328 305 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AC110794.1-201ENST00000505816 425 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AC023813.2-201ENST00000564321 469 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AC067852.3-201ENST00000589177 561 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AC009464.1-201ENST00000615731 469 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AC006386.1-201ENST00000619436 415 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AL590240.3-201ENST00000621416 943 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AC110801.1-201ENST00000623590 212 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AP000770.2-201ENST00000623694 100 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AL137790.1-201ENST00000634283 177 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 AC087190.4-201ENST00000574616 8334 ntBASIC4.14□□□□□ -1.75
ZNF541Q9H0D2 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
ZNF541Q9H0D2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ZNF541Q9H0D2 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ZNF541Q9H0D2 MTND5P28-201ENST00000438005 1594 ntBASIC4.13□□□□□ -1.75
ZNF541Q9H0D2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ZNF541Q9H0D2 SNORD116-23-201ENST00000384645 92 ntBASIC4.13□□□□□ -1.75
ZNF541Q9H0D2 BTBD10P2-201ENST00000404779 676 ntBASIC4.13□□□□□ -1.75
ZNF541Q9H0D2 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.13□□□□□ -1.75
ZNF541Q9H0D2 RNA5SP39-201ENST00000411245 120 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms