Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 HMGN1P24-201ENST00000412282 298 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 UBE2V1P9-201ENST00000414760 368 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 AL158050.1-201ENST00000416077 457 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.04□□□□□ -1.92
COL21A1Q96P44 TRIAP1P1-201ENST00000427062 225 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 AC096632.1-201ENST00000427395 310 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 OR2AS1P-201ENST00000427827 319 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.04□□□□□ -1.92
COL21A1Q96P44 YWHAZP8-201ENST00000436935 731 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 MTND4P15-201ENST00000437913 1033 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 ATP5C1P1-201ENST00000441945 895 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.04□□□□□ -1.92
COL21A1Q96P44 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL21A1Q96P44 RPL7P55-201ENST00000450522 746 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.04□□□□□ -1.92
COL21A1Q96P44 RPS27P23-201ENST00000487608 251 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.04□□□□□ -1.92
COL21A1Q96P44 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.04□□□□□ -1.92
COL21A1Q96P44 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.04□□□□□ -1.92
COL21A1Q96P44 EIF5A2P1-201ENST00000564027 460 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 ZNF415P1-201ENST00000582279 1166 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 OR4G1P-201ENST00000588632 938 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.04□□□□□ -1.92
COL21A1Q96P44 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.04□□□□□ -1.92
COL21A1Q96P44 AC073657.2-201ENST00000605661 303 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 AL157817.1-201ENST00000614264 790 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 AC105227.2-201ENST00000615075 605 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.04□□□□□ -1.92
COL21A1Q96P44 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 AC091903.1-201ENST00000624322 454 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.04□□□□□ -1.92
COL21A1Q96P44 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL21A1Q96P44 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
COL21A1Q96P44 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL21A1Q96P44 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL21A1Q96P44 AC008264.2-201ENST00000610193 3731 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL21A1Q96P44 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
COL21A1Q96P44 MIR591-201ENST00000385290 95 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL21A1Q96P44 TMSB4XP8-201ENST00000402089 135 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 ATF1P1-201ENST00000406040 927 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.03□□□□□ -1.92
COL21A1Q96P44 RNA5SP229-201ENST00000410809 99 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 Z92545.1-201ENST00000411782 234 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 TMSB4XP6-201ENST00000415187 135 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 NDUFB4P5-201ENST00000415445 361 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 HSFY1P1-201ENST00000423928 1178 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 TMSB4XP1-201ENST00000424567 135 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.03□□□□□ -1.92
COL21A1Q96P44 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.03□□□□□ -1.92
COL21A1Q96P44 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.03□□□□□ -1.92
COL21A1Q96P44 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.03□□□□□ -1.92
COL21A1Q96P44 RPS4XP10-201ENST00000465034 731 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL21A1Q96P44 RPL7P5-201ENST00000471472 736 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 SYPL1P1-201ENST00000473622 768 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 ST13P14-201ENST00000474095 734 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 AC021678.1-201ENST00000505195 936 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 AC074250.1-201ENST00000511117 192 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 AP001207.2-201ENST00000519490 539 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.03□□□□□ -1.92
COL21A1Q96P44 HIGD1AP1-201ENST00000550979 275 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.03□□□□□ -1.92
COL21A1Q96P44 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.03□□□□□ -1.92
COL21A1Q96P44 AC011471.1-201ENST00000585766 187 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.03□□□□□ -1.92
COL21A1Q96P44 AC016542.1-201ENST00000608259 493 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 AC005156.1-201ENST00000613371 573 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.03□□□□□ -1.92
COL21A1Q96P44 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.03□□□□□ -1.92
COL21A1Q96P44 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.03□□□□□ -1.92
COL21A1Q96P44 AC073346.2-201ENST00000624724 2058 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL21A1Q96P44 ZNF734P-201ENST00000419494 1534 ntBASIC3.03□□□□□ -1.92
COL21A1Q96P44 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.03□□□□□ -1.92
COL21A1Q96P44 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
COL21A1Q96P44 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
COL21A1Q96P44 AL672296.1-201ENST00000427780 2158 ntBASIC3.02□□□□□ -1.93
COL21A1Q96P44 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL21A1Q96P44 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL21A1Q96P44 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL21A1Q96P44 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL21A1Q96P44 RNA5SP267-201ENST00000364893 126 ntBASIC3.02□□□□□ -1.93
COL21A1Q96P44 U3.19-201ENST00000390893 196 ntBASIC3.02□□□□□ -1.93
COL21A1Q96P44 AP002784.2-201ENST00000397300 549 ntBASIC3.02□□□□□ -1.93
COL21A1Q96P44 RPL31P1-201ENST00000398116 372 ntBASIC3.02□□□□□ -1.93
COL21A1Q96P44 MTND2P16-201ENST00000419987 799 ntBASIC3.02□□□□□ -1.93
COL21A1Q96P44 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.02□□□□□ -1.93
COL21A1Q96P44 OFD1P18Y-201ENST00000420889 959 ntBASIC3.02□□□□□ -1.93
COL21A1Q96P44 AL158156.1-201ENST00000422509 473 ntBASIC3.02□□□□□ -1.93
COL21A1Q96P44 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL21A1Q96P44 AC244505.4-201ENST00000434905 287 ntBASIC3.02□□□□□ -1.93
COL21A1Q96P44 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.02□□□□□ -1.93
COL21A1Q96P44 HMGB1P12-201ENST00000438594 598 ntBASIC3.02□□□□□ -1.93
COL21A1Q96P44 SSXP5-201ENST00000443473 287 ntBASIC3.02□□□□□ -1.93
COL21A1Q96P44 ELOCP13-201ENST00000443934 329 ntBASIC3.02□□□□□ -1.93
COL21A1Q96P44 GTF2IP12-201ENST00000456547 356 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms