Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RPS27P26-201ENST00000494583 239 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 AC097486.1-201ENST00000515331 210 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 HMGN1P28-201ENST00000521340 364 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 AC091516.1-201ENST00000549191 703 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 NPM1P42-201ENST00000560329 862 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 MIR6730-201ENST00000622213 67 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 AC091895.1-201ENST00000624494 256 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 AC068769.1-201ENST00000474767 2426 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 RNU1-19P-201ENST00000363306 165 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 Y_RNA.471-201ENST00000384312 102 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 AL583834.1-201ENST00000406943 343 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 AC093156.1-201ENST00000440382 670 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 AC023141.8-201ENST00000442554 208 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 AL031584.1-201ENST00000447169 754 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 RPS15AP27-201ENST00000449183 343 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 AL035090.1-201ENST00000454835 332 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 ACA64.4-201ENST00000459070 127 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 RPL32P33-201ENST00000487023 394 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 Y_RNA.662-201ENST00000516028 97 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 DUX4L52-201ENST00000549363 777 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 AL359219.2-201ENST00000555184 348 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 AC044860.2-201ENST00000561005 179 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 MIR4643-201ENST00000577473 78 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 FKBP1AP1-201ENST00000594588 318 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 AC097504.1-201ENST00000515103 2415 ntBASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS3Q8IXF0 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AC079753.1-201ENST00000623243 3868 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 GTF2IP4-201ENST00000453092 2054 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AL159987.1-201ENST00000347911 293 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 SNORA74A-201ENST00000364089 198 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 RNU6-532P-201ENST00000384318 107 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 MT-TP-201ENST00000387461 68 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 MIR1286-201ENST00000408112 78 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 RNU6-1156P-201ENST00000410365 100 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 RNU4-78P-201ENST00000410940 126 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AC016027.5-201ENST00000427227 210 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 MED13P1-201ENST00000428342 171 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AL158071.1-201ENST00000430315 461 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AL353997.1-201ENST00000432936 108 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 MRPS21P3-201ENST00000436696 262 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AC004866.2-201ENST00000438285 481 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 RN7SL610P-201ENST00000463845 291 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 RN7SL727P-201ENST00000482164 296 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 RN7SL547P-201ENST00000490793 290 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 AC006499.3-201ENST00000506077 748 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 RNU6-919P-201ENST00000516731 104 ntBASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPAS3Q8IXF0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms