Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC126323.6-202ENST00000568092 3511 ntBASIC4.5□□□□□ -1.69
VRK3Q8IV63 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VRK3Q8IV63 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 Z95327.2-201ENST00000414579 1873 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
VRK3Q8IV63 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VRK3Q8IV63 AC119744.1-201ENST00000454746 1715 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VRK3Q8IV63 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VRK3Q8IV63 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 OR14L1P-202ENST00000641545 3009 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 MAPK10-349ENST00000641767 3661 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
VRK3Q8IV63 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VRK3Q8IV63 AC097461.1-201ENST00000568928 2821 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 AL512646.1-201ENST00000269395 1077 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 RNU6-777P-201ENST00000364265 104 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 RNA5SP505-201ENST00000364748 108 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 SNORD81.2-201ENST00000365153 76 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 RNU6-1151P-201ENST00000384684 107 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 MIR585-201ENST00000384887 94 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VRK3Q8IV63 MIR937-201ENST00000401271 86 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 AL590290.1-201ENST00000405336 380 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 RNU2-6P-201ENST00000411404 190 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 AL589872.1-201ENST00000426602 288 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 SAR1AP4-201ENST00000429225 591 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 HMGB3P10-201ENST00000434734 572 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 TAAR7P-201ENST00000436141 242 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 ACTR3P2-201ENST00000439585 1257 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 AC011753.3-201ENST00000443436 406 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 AL513533.1-201ENST00000453728 415 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 BTF3P5-201ENST00000457252 467 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 RNU6-420P-201ENST00000458780 107 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 RPL21P71-201ENST00000465598 459 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 AC008897.1-201ENST00000494006 347 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 AC025674.1-201ENST00000507074 324 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 RNU6-150P-201ENST00000516237 95 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 AP000859.1-201ENST00000525536 307 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 OR4A12P-201ENST00000530847 918 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 AP001781.1-201ENST00000530977 207 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 AP003072.1-201ENST00000531740 145 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 AL157394.1-201ENST00000562983 1224 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 AL359999.1-201ENST00000604513 294 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 AL136363.1-201ENST00000605349 337 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 AC093788.1-201ENST00000609356 927 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 AC243773.3-201ENST00000613270 256 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VRK3Q8IV63 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VRK3Q8IV63 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 AC024560.2-201ENST00000507981 1497 ntBASIC4.49□□□□□ -1.69
VRK3Q8IV63 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
VRK3Q8IV63 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
VRK3Q8IV63 MAPK10-320ENST00000641462 6696 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC108467.2-201ENST00000617640 1597 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VRK3Q8IV63 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VRK3Q8IV63 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
VRK3Q8IV63 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VRK3Q8IV63 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VRK3Q8IV63 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VRK3Q8IV63 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VRK3Q8IV63 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VRK3Q8IV63 OR52B1P-201ENST00000316506 909 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 AC079741.1-201ENST00000321498 212 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 RNU6-451P-201ENST00000362921 107 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 Y_RNA.159-201ENST00000363674 87 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 SNORD113.2-201ENST00000364166 89 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 RNA5SP151-201ENST00000365632 117 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 SNORD96B-201ENST00000386148 79 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 RNA5SP397-201ENST00000391323 118 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 Z98745.1-201ENST00000402553 494 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 RNU2-50P-201ENST00000410494 143 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.48□□□□□ -1.69
VRK3Q8IV63 SPA17P1-201ENST00000416656 452 ntBASIC4.48□□□□□ -1.69
VRK3Q8IV63 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms