Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 Y_RNA.273-201ENST00000364703 102 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 Y_RNA.383-201ENST00000383855 97 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 RNU6-47P-201ENST00000383866 107 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 U3.39-201ENST00000408569 239 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 RNA5SP156-201ENST00000410250 110 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 RN7SKP51-201ENST00000410781 304 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 Y_RNA.626-201ENST00000411288 95 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 TPT1P12-201ENST00000448968 492 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 TRBV26-201ENST00000456572 344 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 AL359273.1-201ENST00000510918 627 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 RNA5SP438-201ENST00000516561 112 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 RNU6-919P-201ENST00000516731 104 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 AC027229.1-201ENST00000583887 253 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 AC008521.2-201ENST00000591021 259 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 AC006363.1-201ENST00000603806 463 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 AL590240.4-201ENST00000616908 390 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 CYP3A51P-201ENST00000633513 256 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 AL022323.4-201ENST00000623980 13120 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 PABPC1P8-201ENST00000452851 2086 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 AC097461.1-201ENST00000568928 2821 ntBASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.6□□□□□ -1.51
RNFT1Q5M7Z0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 Y_RNA.76-201ENST00000362931 109 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 Y_RNA.151-201ENST00000363566 112 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 RNA5SP510-201ENST00000364697 99 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 SNORA43.1-201ENST00000364863 140 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 RPS29P13-201ENST00000402041 169 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AL024474.1-201ENST00000404655 591 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AC245096.1-201ENST00000413104 546 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 PPIAP20-201ENST00000449839 135 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AL513124.1-201ENST00000450410 614 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AP001992.1-205ENST00000462248 379 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AC114781.3-201ENST00000512083 142 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AC093853.1-201ENST00000515689 483 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 Y_RNA.687-201ENST00000516558 91 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 RNU6-1092P-201ENST00000516955 87 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AC245014.3-201ENST00000618589 347 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AL136228.1-201ENST00000622221 319 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 AL034546.1-201ENST00000623740 3693 ntBASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.59□□□□□ -1.51
RNFT1Q5M7Z0 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms