Protein–RNA interactions for Protein: Q14683

SMC1A, Structural maintenance of chromosomes protein 1A, humanhuman

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1AQ14683 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.93□□□□□ -1.78
SMC1AQ14683 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.93□□□□□ -1.78
SMC1AQ14683 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SMC1AQ14683 SNORD9-201ENST00000362566 104 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 MIR490-201ENST00000384865 128 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 MIR16-1-201ENST00000385271 89 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 RNA5SP424-201ENST00000390988 115 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 RNU6-821P-201ENST00000390995 107 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 SOD2P1-201ENST00000396543 562 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMC1AQ14683 RPS6P14-201ENST00000425165 719 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.93□□□□□ -1.78
SMC1AQ14683 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.93□□□□□ -1.78
SMC1AQ14683 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.93□□□□□ -1.78
SMC1AQ14683 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.93□□□□□ -1.78
SMC1AQ14683 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.93□□□□□ -1.78
SMC1AQ14683 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMC1AQ14683 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMC1AQ14683 AC006480.1-201ENST00000449887 378 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.93□□□□□ -1.78
SMC1AQ14683 SETP6-201ENST00000479329 568 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.93□□□□□ -1.78
SMC1AQ14683 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.93□□□□□ -1.78
SMC1AQ14683 AP001636.2-201ENST00000525517 696 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 AC103843.2-201ENST00000530523 682 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.93□□□□□ -1.78
SMC1AQ14683 AC092451.2-201ENST00000538746 658 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 AC007458.1-201ENST00000542812 373 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.93□□□□□ -1.78
SMC1AQ14683 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.93□□□□□ -1.78
SMC1AQ14683 AC087481.2-201ENST00000565492 330 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMC1AQ14683 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.93□□□□□ -1.78
SMC1AQ14683 VN1R92P-201ENST00000598511 928 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 AL109653.1-201ENST00000603091 248 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.93□□□□□ -1.78
SMC1AQ14683 AL136164.4-201ENST00000625013 2135 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.93□□□□□ -1.78
SMC1AQ14683 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.93□□□□□ -1.78
SMC1AQ14683 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.93□□□□□ -1.78
SMC1AQ14683 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.93□□□□□ -1.78
SMC1AQ14683 ZNF826P-207ENST00000622273 1910 ntBASIC3.93□□□□□ -1.78
SMC1AQ14683 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SMC1AQ14683 AC130650.2-201ENST00000618736 2403 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SMC1AQ14683 RPL7P26-201ENST00000333817 754 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 MIR30E-201ENST00000362104 92 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
SMC1AQ14683 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.92□□□□□ -1.78
SMC1AQ14683 AP002784.2-201ENST00000397300 549 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 NDUFB4P4-201ENST00000404822 243 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.92□□□□□ -1.78
SMC1AQ14683 AIMP1P1-201ENST00000418670 937 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.92□□□□□ -1.78
SMC1AQ14683 AL049610.1-201ENST00000423374 372 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.92□□□□□ -1.78
SMC1AQ14683 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.92□□□□□ -1.78
SMC1AQ14683 CYCSP32-201ENST00000440548 321 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 CDC42P1-201ENST00000456658 548 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 RPL32P14-201ENST00000463196 378 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.92□□□□□ -1.78
SMC1AQ14683 AC021146.5-201ENST00000503544 545 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.92□□□□□ -1.78
SMC1AQ14683 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.92□□□□□ -1.78
SMC1AQ14683 AC121161.1-201ENST00000510606 652 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 OR7E13P-201ENST00000526052 910 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 AC019227.1-201ENST00000526902 510 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.92□□□□□ -1.78
SMC1AQ14683 AC008011.1-201ENST00000545989 227 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 AL121766.1-201ENST00000547436 487 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.92□□□□□ -1.78
SMC1AQ14683 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.92□□□□□ -1.78
SMC1AQ14683 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.92□□□□□ -1.78
SMC1AQ14683 MIR7851-201ENST00000610611 160 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 AL355365.1-201ENST00000616480 294 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 AC018755.4-201ENST00000619715 454 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 AC018816.2-201ENST00000621460 353 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.92□□□□□ -1.78
SMC1AQ14683 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.92□□□□□ -1.78
SMC1AQ14683 AP000553.6-201ENST00000641242 118 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 MTCO1P4-201ENST00000520516 1409 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SMC1AQ14683 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SMC1AQ14683 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SMC1AQ14683 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.92□□□□□ -1.78
SMC1AQ14683 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.92□□□□□ -1.78
SMC1AQ14683 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SMC1AQ14683 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.91□□□□□ -1.78
SMC1AQ14683 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMC1AQ14683 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.91□□□□□ -1.78
SMC1AQ14683 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.91□□□□□ -1.78
SMC1AQ14683 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMC1AQ14683 AL121978.1-201ENST00000402778 359 ntBASIC3.91□□□□□ -1.78
SMC1AQ14683 AL023807.1-201ENST00000407932 359 ntBASIC3.91□□□□□ -1.78
SMC1AQ14683 RNU4-65P-201ENST00000410473 140 ntBASIC3.91□□□□□ -1.78
SMC1AQ14683 BX664727.1-201ENST00000416024 466 ntBASIC3.91□□□□□ -1.78
SMC1AQ14683 HMGB3P20-201ENST00000417997 600 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms