Protein–RNA interactions for Protein: Q01955

COL4A3, Collagen alpha-3(IV) chain, humanhuman

Predictions only

Length 1,670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3Q01955 MIR1302-10-201ENST00000408734 138 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 RN7SKP222-201ENST00000410651 315 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 RNU6-195P-201ENST00000411352 109 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 AC093578.1-201ENST00000415219 368 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 AF228730.4-201ENST00000421457 183 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A3Q01955 GOT2P5-201ENST00000433995 546 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 AC114495.1-201ENST00000441274 436 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 RPL23AP20-201ENST00000447965 421 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 AC132479.1-201ENST00000449160 144 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A3Q01955 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A3Q01955 NDUFA5P7-201ENST00000452914 242 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.52□□□□□ -1.69
COL4A3Q01955 MTND1P3-201ENST00000484956 952 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 MTCO3P9-201ENST00000506989 781 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A3Q01955 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A3Q01955 NPM1P41-201ENST00000512920 831 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A3Q01955 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A3Q01955 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.52□□□□□ -1.69
COL4A3Q01955 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A3Q01955 AP000790.1-201ENST00000528891 737 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.52□□□□□ -1.69
COL4A3Q01955 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.52□□□□□ -1.69
COL4A3Q01955 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.52□□□□□ -1.69
COL4A3Q01955 MIR4795-201ENST00000584182 89 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 AC011471.1-201ENST00000585766 187 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A3Q01955 AC245014.2-201ENST00000603689 287 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 AC246785.4-201ENST00000605374 287 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 MIR1302-2-201ENST00000607096 138 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 AL356274.1-201ENST00000617064 410 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL4A3Q01955 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.52□□□□□ -1.69
COL4A3Q01955 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A3Q01955 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A3Q01955 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.52□□□□□ -1.69
COL4A3Q01955 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A3Q01955 AC139769.1-204ENST00000472297 1931 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A3Q01955 AC138915.3-201ENST00000562908 1389 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
COL4A3Q01955 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A3Q01955 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A3Q01955 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A3Q01955 DDX18P4-201ENST00000511690 1966 ntBASIC4.52□□□□□ -1.69
COL4A3Q01955 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.52□□□□□ -1.69
COL4A3Q01955 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A3Q01955 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A3Q01955 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A3Q01955 Y_RNA.460-201ENST00000384255 102 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.51□□□□□ -1.69
COL4A3Q01955 SPA17P1-201ENST00000416656 452 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.51□□□□□ -1.69
COL4A3Q01955 HMGB3P20-201ENST00000417997 600 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 YME1L1P1-201ENST00000429435 297 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 AC005534.2-201ENST00000431047 433 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.51□□□□□ -1.69
COL4A3Q01955 VN1R105P-201ENST00000486595 910 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 AC112204.1-201ENST00000502591 103 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.51□□□□□ -1.69
COL4A3Q01955 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.51□□□□□ -1.69
COL4A3Q01955 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.51□□□□□ -1.69
COL4A3Q01955 AC093809.1-201ENST00000509155 340 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 KCTD9P2-201ENST00000512203 1013 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.51□□□□□ -1.69
COL4A3Q01955 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.51□□□□□ -1.69
COL4A3Q01955 AP003467.2-201ENST00000520175 319 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A3Q01955 AP003034.1-201ENST00000534621 422 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.51□□□□□ -1.69
COL4A3Q01955 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.51□□□□□ -1.69
COL4A3Q01955 MIR4286-201ENST00000580651 93 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 MIR4472-2-201ENST00000582069 67 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 AL451049.1-201ENST00000608672 497 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 AC243773.3-201ENST00000613270 256 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 AC009268.2-201ENST00000621925 457 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 AC138965.3-201ENST00000623875 498 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.51□□□□□ -1.69
COL4A3Q01955 AC006378.2-201ENST00000623178 2476 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A3Q01955 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
COL4A3Q01955 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
COL4A3Q01955 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
COL4A3Q01955 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.51□□□□□ -1.69
COL4A3Q01955 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A3Q01955 AL161912.2-201ENST00000565707 3007 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.51□□□□□ -1.69
COL4A3Q01955 OR4G11P-202ENST00000642116 1414 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A3Q01955 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A3Q01955 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A3Q01955 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A3Q01955 OR11H4-201ENST00000315409 1082 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.51□□□□□ -1.69
COL4A3Q01955 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 NPM1P38-201ENST00000403835 865 ntBASIC4.51□□□□□ -1.69
COL4A3Q01955 RN7SKP202-201ENST00000410439 330 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms