Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.4□□□□□ -1.71
CLRN1P58418 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.4□□□□□ -1.71
CLRN1P58418 MTCO3P44-201ENST00000510977 541 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 AC021146.1-201ENST00000511202 716 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.4□□□□□ -1.71
CLRN1P58418 RNA5SP249-201ENST00000516127 99 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 RN7SKP277-201ENST00000516895 283 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 RNU6-835P-201ENST00000516974 104 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.4□□□□□ -1.71
CLRN1P58418 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 AP003072.2-201ENST00000527756 676 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 OR4P1P-201ENST00000530808 1136 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.4□□□□□ -1.71
CLRN1P58418 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CLRN1P58418 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.4□□□□□ -1.71
CLRN1P58418 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.4□□□□□ -1.71
CLRN1P58418 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.4□□□□□ -1.71
CLRN1P58418 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.4□□□□□ -1.71
CLRN1P58418 AC006116.3-201ENST00000592968 361 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 AC087783.2-201ENST00000605070 562 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 BNIP3P10-201ENST00000605360 577 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 AP003117.2-201ENST00000606010 545 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 AC093799.2-201ENST00000610062 578 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 TUG1_1.1-201ENST00000610654 145 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLRN1P58418 AC010338.1-201ENST00000621823 717 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 AP001005.3-201ENST00000622049 129 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.4□□□□□ -1.71
CLRN1P58418 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLRN1P58418 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CLRN1P58418 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLRN1P58418 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CLRN1P58418 AC105074.1-201ENST00000623380 3095 ntBASIC4.4□□□□□ -1.71
CLRN1P58418 AC139713.2-215ENST00000641428 5037 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 AC008758.3-201ENST00000507003 1829 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLRN1P58418 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLRN1P58418 C4BPAP1-201ENST00000415474 1893 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.39□□□□□ -1.71
CLRN1P58418 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.39□□□□□ -1.71
CLRN1P58418 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.39□□□□□ -1.71
CLRN1P58418 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.39□□□□□ -1.71
CLRN1P58418 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CLRN1P58418 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.39□□□□□ -1.71
CLRN1P58418 Y_RNA.86-201ENST00000363020 111 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 RNU6-1097P-201ENST00000363586 107 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 RNA5SP428-201ENST00000365129 132 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 SNORA69-201ENST00000383895 132 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 RNU6-178P-201ENST00000384631 104 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 RNU6-1158P-201ENST00000391167 107 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.39□□□□□ -1.71
CLRN1P58418 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.39□□□□□ -1.71
CLRN1P58418 OR9R1P-201ENST00000412200 877 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 GJA6P-201ENST00000415117 1042 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 AF186996.5-201ENST00000418098 904 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 AC093162.1-201ENST00000419682 124 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 RPL30P3-201ENST00000424262 333 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 AL513185.2-201ENST00000425543 193 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 EZH2P1-201ENST00000431167 291 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 TIMM9P1-201ENST00000436122 256 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 FTH1P1-201ENST00000437933 532 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.39□□□□□ -1.71
CLRN1P58418 AL353691.1-201ENST00000451332 387 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 ELOCP23-201ENST00000452014 332 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 BX276092.4-201ENST00000452056 248 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 RPS20P20-201ENST00000460498 340 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 RPS17P2-201ENST00000461663 408 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 RN7SL629P-201ENST00000489622 285 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 COX7A2P2-201ENST00000505291 250 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 MTND3P22-201ENST00000510932 243 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 RN7SKP147-201ENST00000517154 244 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 Y_RNA.719-201ENST00000517156 106 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 AC027308.1-201ENST00000517993 110 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.39□□□□□ -1.71
CLRN1P58418 AC005868.1-201ENST00000536421 331 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.39□□□□□ -1.71
CLRN1P58418 AC123904.3-201ENST00000547218 814 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.39□□□□□ -1.71
CLRN1P58418 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.39□□□□□ -1.71
CLRN1P58418 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.39□□□□□ -1.71
CLRN1P58418 KC877982.1-201ENST00000602313 470 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 AC104687.2-201ENST00000604442 342 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.39□□□□□ -1.71
CLRN1P58418 OR6R2P-201ENST00000609216 300 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.39□□□□□ -1.71
CLRN1P58418 AC015914.2-201ENST00000618167 288 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.39□□□□□ -1.71
CLRN1P58418 AL359697.1-201ENST00000624879 587 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.39□□□□□ -1.71
CLRN1P58418 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLRN1P58418 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLRN1P58418 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLRN1P58418 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLRN1P58418 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLRN1P58418 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 AC092326.2-201ENST00000624772 1561 ntBASIC4.39□□□□□ -1.71
CLRN1P58418 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLRN1P58418 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms