Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCNKAP51800 AC017037.1-201ENST00000508460 471 ntBASIC3.96□□□□□ -1.78
CLCNKAP51800 RNU6-583P-201ENST00000516012 92 ntBASIC3.96□□□□□ -1.78
CLCNKAP51800 RNA5SP309-201ENST00000516670 106 ntBASIC3.96□□□□□ -1.78
CLCNKAP51800 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCNKAP51800 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.96□□□□□ -1.78
CLCNKAP51800 OR7K1P-201ENST00000546439 926 ntBASIC3.96□□□□□ -1.78
CLCNKAP51800 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCNKAP51800 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCNKAP51800 CBX3P5-201ENST00000552017 521 ntBASIC3.96□□□□□ -1.78
CLCNKAP51800 MTCYBP28-201ENST00000566728 1132 ntBASIC3.96□□□□□ -1.78
CLCNKAP51800 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.96□□□□□ -1.78
CLCNKAP51800 AC053481.4-201ENST00000583164 216 ntBASIC3.96□□□□□ -1.78
CLCNKAP51800 AL590229.1-201ENST00000603497 542 ntBASIC3.96□□□□□ -1.78
CLCNKAP51800 MIR6868-201ENST00000611215 58 ntBASIC3.96□□□□□ -1.78
CLCNKAP51800 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CLCNKAP51800 AL031667.3-201ENST00000620124 655 ntBASIC3.96□□□□□ -1.78
CLCNKAP51800 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLCNKAP51800 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.96□□□□□ -1.78
CLCNKAP51800 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLCNKAP51800 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.96□□□□□ -1.78
CLCNKAP51800 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCNKAP51800 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLCNKAP51800 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.96□□□□□ -1.78
CLCNKAP51800 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLCNKAP51800 AC011477.1-204ENST00000623416 1325 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLCNKAP51800 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLCNKAP51800 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.95□□□□□ -1.78
CLCNKAP51800 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CLCNKAP51800 CR381670.1-201ENST00000624291 1693 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLCNKAP51800 Y_RNA.18-201ENST00000362461 102 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 RNA5SP388-201ENST00000362584 119 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 Y_RNA.318-201ENST00000365131 97 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.95□□□□□ -1.78
CLCNKAP51800 EIF5P1-201ENST00000400019 1231 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AL031577.2-201ENST00000404133 280 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 RNU6-920P-201ENST00000410926 92 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 MTCYBP38-201ENST00000417160 1123 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 SEPT2P1-201ENST00000419651 180 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCNKAP51800 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCNKAP51800 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.95□□□□□ -1.78
CLCNKAP51800 ELOCP18-201ENST00000434209 337 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AL590103.1-201ENST00000434488 307 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 THAP5P1-201ENST00000439089 262 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AC092427.1-201ENST00000439177 601 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.95□□□□□ -1.78
CLCNKAP51800 VN1R10P-201ENST00000447106 875 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 RPL26P28-201ENST00000451325 435 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCNKAP51800 ARPC3P2-201ENST00000457786 533 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCNKAP51800 AC010301.1-201ENST00000473936 355 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AC072039.1-201ENST00000477611 581 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AC110792.1-201ENST00000491826 472 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AC078817.1-201ENST00000492623 435 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.95□□□□□ -1.78
CLCNKAP51800 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CLCNKAP51800 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLCNKAP51800 MTCYBP43-201ENST00000513621 740 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 RNU4-60P-201ENST00000517239 135 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCNKAP51800 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCNKAP51800 OR5M7P-201ENST00000526140 972 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
CLCNKAP51800 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.95□□□□□ -1.78
CLCNKAP51800 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.95□□□□□ -1.78
CLCNKAP51800 AC007954.1-201ENST00000554198 494 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCNKAP51800 AC022968.1-201ENST00000567372 442 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.95□□□□□ -1.78
CLCNKAP51800 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.95□□□□□ -1.78
CLCNKAP51800 WISP1-OT1-201ENST00000602893 642 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AL049634.3-201ENST00000604968 457 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AC113194.1-201ENST00000606037 500 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AC024560.3-201ENST00000608482 349 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AC084782.3-201ENST00000612282 578 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.95□□□□□ -1.78
CLCNKAP51800 AC092192.1-201ENST00000633154 1018 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 PCMTD1P7-201ENST00000634506 357 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 AL161912.2-201ENST00000565707 3007 ntBASIC3.95□□□□□ -1.78
CLCNKAP51800 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CLCNKAP51800 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLCNKAP51800 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLCNKAP51800 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLCNKAP51800 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLCNKAP51800 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.95□□□□□ -1.78
CLCNKAP51800 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.95□□□□□ -1.78
CLCNKAP51800 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLCNKAP51800 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.95□□□□□ -1.78
CLCNKAP51800 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.95□□□□□ -1.78
CLCNKAP51800 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLCNKAP51800 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
CLCNKAP51800 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.94□□□□□ -1.78
CLCNKAP51800 AC027287.1-201ENST00000553115 1453 ntBASIC3.94□□□□□ -1.78
CLCNKAP51800 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLCNKAP51800 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms