Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
USP11P51784 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
USP11P51784 AC073136.1-201ENST00000449426 2884 ntBASIC5.74□□□□□ -1.49
USP11P51784 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.74□□□□□ -1.49
USP11P51784 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.74□□□□□ -1.49
USP11P51784 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
USP11P51784 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
USP11P51784 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
USP11P51784 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
USP11P51784 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.73□□□□□ -1.49
USP11P51784 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
USP11P51784 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USP11P51784 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
USP11P51784 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.73□□□□□ -1.49
USP11P51784 AC091046.3-201ENST00000631455 1574 ntBASIC5.73□□□□□ -1.49
USP11P51784 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
USP11P51784 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.73□□□□□ -1.49
USP11P51784 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USP11P51784 RN7SKP44-201ENST00000363602 316 ntBASIC5.73□□□□□ -1.49
USP11P51784 RNA5SP428-201ENST00000365129 132 ntBASIC5.73□□□□□ -1.49
USP11P51784 RNA5SP455-201ENST00000365190 119 ntBASIC5.73□□□□□ -1.49
USP11P51784 RNU6-784P-201ENST00000384330 106 ntBASIC5.73□□□□□ -1.49
USP11P51784 RPL21P67-201ENST00000402896 478 ntBASIC5.73□□□□□ -1.49
USP11P51784 U3.32-201ENST00000408116 212 ntBASIC5.73□□□□□ -1.49
USP11P51784 SNORA77-201ENST00000408716 125 ntBASIC5.73□□□□□ -1.49
USP11P51784 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.73□□□□□ -1.49
USP11P51784 AL451054.2-201ENST00000420896 202 ntBASIC5.73□□□□□ -1.49
USP11P51784 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.73□□□□□ -1.49
USP11P51784 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.73□□□□□ -1.49
USP11P51784 AC073069.1-201ENST00000428657 441 ntBASIC5.73□□□□□ -1.49
USP11P51784 RPS27P18-201ENST00000431701 247 ntBASIC5.73□□□□□ -1.49
USP11P51784 RPS3AP52-201ENST00000435639 297 ntBASIC5.73□□□□□ -1.49
USP11P51784 RHOT1P3-201ENST00000436571 331 ntBASIC5.73□□□□□ -1.49
USP11P51784 RPL7AP61-201ENST00000443410 636 ntBASIC5.73□□□□□ -1.49
USP11P51784 AC104651.2-201ENST00000447549 528 ntBASIC5.73□□□□□ -1.49
USP11P51784 DHFRP3-201ENST00000455595 559 ntBASIC5.73□□□□□ -1.49
USP11P51784 AL133244.1-201ENST00000456007 258 ntBASIC5.73□□□□□ -1.49
USP11P51784 RNU7-63P-201ENST00000459054 62 ntBASIC5.73□□□□□ -1.49
USP11P51784 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.73□□□□□ -1.49
USP11P51784 AC108471.1-201ENST00000513977 287 ntBASIC5.73□□□□□ -1.49
USP11P51784 RNU6-1137P-201ENST00000517073 99 ntBASIC5.73□□□□□ -1.49
USP11P51784 SNORA25.17-201ENST00000517184 124 ntBASIC5.73□□□□□ -1.49
USP11P51784 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.73□□□□□ -1.49
USP11P51784 AP006245.2-201ENST00000522004 300 ntBASIC5.73□□□□□ -1.49
USP11P51784 LSM3P2-201ENST00000551246 273 ntBASIC5.73□□□□□ -1.49
USP11P51784 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.73□□□□□ -1.49
USP11P51784 HSPE1P3-201ENST00000559254 309 ntBASIC5.73□□□□□ -1.49
USP11P51784 MIR5186-201ENST00000577504 120 ntBASIC5.73□□□□□ -1.49
USP11P51784 SNORD39.3-201ENST00000584451 71 ntBASIC5.73□□□□□ -1.49
USP11P51784 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.73□□□□□ -1.49
USP11P51784 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
USP11P51784 EIF3FP1-201ENST00000613970 806 ntBASIC5.73□□□□□ -1.49
USP11P51784 AC087588.2-201ENST00000617667 426 ntBASIC5.73□□□□□ -1.49
USP11P51784 AC119674.1-207ENST00000641355 633 ntBASIC5.73□□□□□ -1.49
USP11P51784 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.73□□□□□ -1.49
USP11P51784 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.73□□□□□ -1.49
USP11P51784 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
USP11P51784 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USP11P51784 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.73□□□□□ -1.49
USP11P51784 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.73□□□□□ -1.49
USP11P51784 ZNF652P1-201ENST00000442420 1309 ntBASIC5.73□□□□□ -1.49
USP11P51784 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP11P51784 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.72□□□□□ -1.49
USP11P51784 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP11P51784 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
USP11P51784 AL049780.3-201ENST00000624612 1583 ntBASIC5.72□□□□□ -1.49
USP11P51784 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.72□□□□□ -1.49
USP11P51784 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.72□□□□□ -1.49
USP11P51784 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
USP11P51784 AC073343.1-201ENST00000328239 651 ntBASIC5.72□□□□□ -1.49
USP11P51784 RNU6-1297P-201ENST00000384415 104 ntBASIC5.72□□□□□ -1.49
USP11P51784 RNU6-505P-201ENST00000384427 107 ntBASIC5.72□□□□□ -1.49
USP11P51784 RNU6-308P-201ENST00000390957 107 ntBASIC5.72□□□□□ -1.49
USP11P51784 AL583835.1-201ENST00000399570 407 ntBASIC5.72□□□□□ -1.49
USP11P51784 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP11P51784 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.72□□□□□ -1.49
USP11P51784 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.72□□□□□ -1.49
USP11P51784 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.72□□□□□ -1.49
USP11P51784 PSMD10P3-201ENST00000437000 448 ntBASIC5.72□□□□□ -1.49
USP11P51784 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.72□□□□□ -1.49
USP11P51784 AL450023.3-201ENST00000440592 271 ntBASIC5.72□□□□□ -1.49
USP11P51784 TCEA1P1-201ENST00000449716 880 ntBASIC5.72□□□□□ -1.49
USP11P51784 HMGB1P4-201ENST00000455362 567 ntBASIC5.72□□□□□ -1.49
USP11P51784 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.72□□□□□ -1.49
USP11P51784 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.72□□□□□ -1.49
USP11P51784 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.72□□□□□ -1.49
USP11P51784 RNU6-202P-201ENST00000515998 96 ntBASIC5.72□□□□□ -1.49
USP11P51784 NARSP2-201ENST00000518524 679 ntBASIC5.72□□□□□ -1.49
USP11P51784 IGKV2-36-201ENST00000519999 223 ntBASIC5.72□□□□□ -1.49
USP11P51784 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.72□□□□□ -1.49
USP11P51784 AC008562.1-201ENST00000521763 330 ntBASIC5.72□□□□□ -1.49
USP11P51784 AC018442.3-201ENST00000523025 183 ntBASIC5.72□□□□□ -1.49
USP11P51784 AP000859.1-201ENST00000525536 307 ntBASIC5.72□□□□□ -1.49
USP11P51784 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.72□□□□□ -1.49
USP11P51784 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.72□□□□□ -1.49
USP11P51784 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.72□□□□□ -1.49
USP11P51784 LARP7P2-201ENST00000575306 125 ntBASIC5.72□□□□□ -1.49
USP11P51784 MAGOH2P-202ENST00000584384 429 ntBASIC5.72□□□□□ -1.49
USP11P51784 MIR3149-201ENST00000584629 83 ntBASIC5.72□□□□□ -1.49
USP11P51784 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms