Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CHRNA4P43681 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA4P43681 AC025125.1-201ENST00000624743 1922 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CHRNA4P43681 AP002512.4-202ENST00000641599 4530 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CHRNA4P43681 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA4P43681 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA4P43681 RN7SKP185-201ENST00000362813 326 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 RNY1-201ENST00000364228 113 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 RNU6-744P-201ENST00000365557 107 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CHRNA4P43681 RNU6-1316P-201ENST00000384242 108 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 RNA5SP284-201ENST00000384547 118 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 Y_RNA.539-201ENST00000384635 107 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 U3.25-201ENST00000391209 220 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 EIF4E2P1-201ENST00000393781 255 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 RNU6-1050P-201ENST00000410388 107 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 RNA5SP498-201ENST00000411342 120 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.64□□□□□ -1.51
CHRNA4P43681 REREP1Y-201ENST00000422655 198 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 MTND6P12-201ENST00000428247 522 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 REREP2Y-201ENST00000439103 200 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 AL596266.1-201ENST00000448132 400 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 AL118520.1-201ENST00000450770 291 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 AL138752.1-201ENST00000452964 351 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 AC133473.1-201ENST00000455173 299 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 RPS3AP41-201ENST00000462701 778 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 AC007998.1-201ENST00000474156 672 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 RN7SL583P-201ENST00000475692 287 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 AC011005.3-201ENST00000491624 395 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 HIGD1AP13-201ENST00000509878 289 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.64□□□□□ -1.51
CHRNA4P43681 CYCSP22-201ENST00000517555 339 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.64□□□□□ -1.51
CHRNA4P43681 AC122688.1-201ENST00000541494 223 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.64□□□□□ -1.51
CHRNA4P43681 MIR4775-201ENST00000581168 75 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.64□□□□□ -1.51
CHRNA4P43681 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.64□□□□□ -1.51
CHRNA4P43681 AL138726.1-201ENST00000614873 333 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 AC025574.2-201ENST00000615621 514 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 MIR6729-201ENST00000618194 65 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.64□□□□□ -1.51
CHRNA4P43681 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
CHRNA4P43681 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.64□□□□□ -1.51
CHRNA4P43681 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA4P43681 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA4P43681 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.64□□□□□ -1.51
CHRNA4P43681 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNA4P43681 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CHRNA4P43681 AC025470.1-201ENST00000510053 2032 ntBASIC5.64□□□□□ -1.51
CHRNA4P43681 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.63□□□□□ -1.51
CHRNA4P43681 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA4P43681 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA4P43681 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA4P43681 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA4P43681 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA4P43681 OR13C1P-202ENST00000641378 2919 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.63□□□□□ -1.51
CHRNA4P43681 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CHRNA4P43681 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CHRNA4P43681 HSPE1P11-201ENST00000339579 310 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 Y_RNA.26-201ENST00000362539 101 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 RNU6-704P-201ENST00000364162 103 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 RNU6-853P-201ENST00000364306 107 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 SNORD14.1-201ENST00000365609 90 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 RNU6-190P-201ENST00000384154 102 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
CHRNA4P43681 Y_RNA.594-201ENST00000410373 140 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 AL354868.1-201ENST00000417077 482 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.63□□□□□ -1.51
CHRNA4P43681 ELOCP20-201ENST00000422460 345 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 RPS29P14-201ENST00000431518 171 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 RPL23AP19-201ENST00000436229 369 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 AL031663.1-201ENST00000437445 219 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 AC019185.1-201ENST00000442718 389 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 AC002381.1-201ENST00000447049 280 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 AC243772.1-201ENST00000451620 410 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 NXT1P1-201ENST00000458481 316 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 RN7SL72P-201ENST00000460697 269 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.63□□□□□ -1.51
CHRNA4P43681 TMEM251P1-201ENST00000503717 318 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.63□□□□□ -1.51
CHRNA4P43681 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.63□□□□□ -1.51
CHRNA4P43681 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.63□□□□□ -1.51
CHRNA4P43681 IGLVIV-64-201ENST00000518581 301 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 PMS2P3-207ENST00000529061 717 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.63□□□□□ -1.51
CHRNA4P43681 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.63□□□□□ -1.51
CHRNA4P43681 MIR4703-201ENST00000577728 79 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.63□□□□□ -1.51
CHRNA4P43681 HMGB1P50-201ENST00000605814 607 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.63□□□□□ -1.51
CHRNA4P43681 AL627230.1-201ENST00000613077 211 ntBASIC5.63□□□□□ -1.51
CHRNA4P43681 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.63□□□□□ -1.51
CHRNA4P43681 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA4P43681 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHRNA4P43681 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.63□□□□□ -1.51
CHRNA4P43681 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms