Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.28□□□□□ -1.88
FDFT1P37268 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.28□□□□□ -1.88
FDFT1P37268 AC098483.2-201ENST00000603158 454 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 AP004247.3-201ENST00000608682 624 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 VIS1.1-201ENST00000610517 203 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 AL354976.1-201ENST00000613843 387 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 AC105227.2-201ENST00000615075 605 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 CR381572.1-201ENST00000625098 102 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
FDFT1P37268 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.28□□□□□ -1.88
FDFT1P37268 AC004925.1-201ENST00000624256 2706 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.28□□□□□ -1.88
FDFT1P37268 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
FDFT1P37268 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.28□□□□□ -1.88
FDFT1P37268 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
FDFT1P37268 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
FDFT1P37268 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
FDFT1P37268 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.27□□□□□ -1.89
FDFT1P37268 RNU6-263P-201ENST00000363811 107 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 RNU1-33P-201ENST00000364249 162 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 DEFB109C-201ENST00000382575 264 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 DEFB109B-201ENST00000382656 264 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 SNORD65C-201ENST00000390962 71 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 RPL21P3-201ENST00000395517 478 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 PTMAP2-201ENST00000397627 327 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
FDFT1P37268 AL356967.1-201ENST00000406305 431 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 NDUFB4P5-201ENST00000415445 361 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 BX664727.1-201ENST00000416024 466 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 OR1AA1P-201ENST00000419597 916 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 AC233981.1-201ENST00000423224 461 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 AL009174.1-201ENST00000426577 416 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.27□□□□□ -1.89
FDFT1P37268 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.27□□□□□ -1.89
FDFT1P37268 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.27□□□□□ -1.89
FDFT1P37268 AC004022.1-201ENST00000447766 1066 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 ELOCP23-201ENST00000452014 332 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 NECAP1P2-201ENST00000455668 727 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 AC146507.2-201ENST00000460608 476 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 AC093278.1-201ENST00000494700 600 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 POU5F1P7-201ENST00000508759 541 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 AC121161.1-201ENST00000510606 652 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 RNA5SP468-201ENST00000516782 93 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 AP003049.1-201ENST00000529418 457 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 AC010198.2-201ENST00000550612 259 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.27□□□□□ -1.89
FDFT1P37268 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.27□□□□□ -1.89
FDFT1P37268 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.27□□□□□ -1.89
FDFT1P37268 AL390240.1-201ENST00000612950 384 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 AC068722.2-201ENST00000618734 544 ntBASIC3.27□□□□□ -1.89
FDFT1P37268 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.27□□□□□ -1.89
FDFT1P37268 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.27□□□□□ -1.89
FDFT1P37268 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
FDFT1P37268 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
FDFT1P37268 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
FDFT1P37268 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.26□□□□□ -1.89
FDFT1P37268 AC007256.1-201ENST00000392253 2765 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.26□□□□□ -1.89
FDFT1P37268 MTND5P24-201ENST00000438892 1767 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
FDFT1P37268 RNU6-50P-201ENST00000362356 103 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 Y_RNA.126-201ENST00000363382 111 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 U3.6-201ENST00000363622 211 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FDFT1P37268 MIR200C-201ENST00000384980 68 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 RNA5SP129-201ENST00000410276 118 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 RNU2-72P-201ENST00000411175 163 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.26□□□□□ -1.89
FDFT1P37268 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.26□□□□□ -1.89
FDFT1P37268 RPS7P15-201ENST00000415804 584 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.26□□□□□ -1.89
FDFT1P37268 GOT2P5-201ENST00000433995 546 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 KCTD10P1-201ENST00000434203 625 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.26□□□□□ -1.89
FDFT1P37268 GXYLT1P1-201ENST00000446657 490 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 SSXP4-201ENST00000451349 245 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.26□□□□□ -1.89
FDFT1P37268 GTF2IP12-201ENST00000456547 356 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 RPL32P14-201ENST00000463196 378 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.26□□□□□ -1.89
FDFT1P37268 AC012181.1-201ENST00000479895 423 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.26□□□□□ -1.89
FDFT1P37268 AC008628.1-201ENST00000508663 265 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.26□□□□□ -1.89
FDFT1P37268 MTCO3P44-201ENST00000510977 541 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 RNU1-61P-201ENST00000516107 151 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 RNU6-416P-201ENST00000516265 103 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 RPL12P22-201ENST00000519073 490 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
FDFT1P37268 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.26□□□□□ -1.89
FDFT1P37268 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.26□□□□□ -1.89
FDFT1P37268 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.26□□□□□ -1.89
FDFT1P37268 AC093510.2-201ENST00000562820 896 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 AC074051.3-201ENST00000570238 358 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 MIR2682-201ENST00000580305 110 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 AL020997.2-201ENST00000602607 184 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 AC005776.1-201ENST00000603164 290 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 HSPE1P14-201ENST00000605812 302 ntBASIC3.26□□□□□ -1.89
FDFT1P37268 uc_338.25-201ENST00000613756 156 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms