Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.71□□□□□ -1.82
VIMP08670 HMGB1P25-201ENST00000468402 607 ntBASIC3.71□□□□□ -1.82
VIMP08670 AC010285.1-201ENST00000470580 392 ntBASIC3.71□□□□□ -1.82
VIMP08670 RPS15AP17-201ENST00000470598 390 ntBASIC3.71□□□□□ -1.82
VIMP08670 AC041039.1-201ENST00000485656 536 ntBASIC3.71□□□□□ -1.82
VIMP08670 SETP14-201ENST00000497538 873 ntBASIC3.71□□□□□ -1.82
VIMP08670 AC093720.1-201ENST00000505681 714 ntBASIC3.71□□□□□ -1.82
VIMP08670 SNORA31.20-201ENST00000517111 133 ntBASIC3.71□□□□□ -1.82
VIMP08670 RN7SKP289-201ENST00000517244 295 ntBASIC3.71□□□□□ -1.82
VIMP08670 AC104986.1-201ENST00000517978 436 ntBASIC3.71□□□□□ -1.82
VIMP08670 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.71□□□□□ -1.82
VIMP08670 YPEL5P3-201ENST00000547227 352 ntBASIC3.71□□□□□ -1.82
VIMP08670 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.71□□□□□ -1.82
VIMP08670 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.71□□□□□ -1.82
VIMP08670 KPNA2P3-201ENST00000584190 848 ntBASIC3.71□□□□□ -1.82
VIMP08670 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.71□□□□□ -1.82
VIMP08670 AC245036.5-201ENST00000596330 847 ntBASIC3.71□□□□□ -1.82
VIMP08670 AL163642.2-201ENST00000604722 1019 ntBASIC3.71□□□□□ -1.82
VIMP08670 AC069304.2-201ENST00000605154 435 ntBASIC3.71□□□□□ -1.82
VIMP08670 AC128687.1-201ENST00000605304 619 ntBASIC3.71□□□□□ -1.82
VIMP08670 AC027449.1-201ENST00000608890 407 ntBASIC3.71□□□□□ -1.82
VIMP08670 AC107075.1-201ENST00000613695 314 ntBASIC3.71□□□□□ -1.82
VIMP08670 MIR8059-201ENST00000620427 81 ntBASIC3.71□□□□□ -1.82
VIMP08670 AC073530.2-201ENST00000623987 261 ntBASIC3.71□□□□□ -1.82
VIMP08670 AC112200.1-201ENST00000625015 234 ntBASIC3.71□□□□□ -1.82
VIMP08670 AC091925.2-201ENST00000625059 256 ntBASIC3.71□□□□□ -1.82
VIMP08670 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
VIMP08670 AL079305.1-201ENST00000623159 3008 ntBASIC3.71□□□□□ -1.82
VIMP08670 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VIMP08670 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.71□□□□□ -1.82
VIMP08670 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
VIMP08670 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.7□□□□□ -1.82
VIMP08670 AC099786.3-201ENST00000565735 1410 ntBASIC3.7□□□□□ -1.82
VIMP08670 AP001350.1-201ENST00000601906 1524 ntBASIC3.7□□□□□ -1.82
VIMP08670 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
VIMP08670 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VIMP08670 MIR30E-201ENST00000362104 92 ntBASIC3.7□□□□□ -1.82
VIMP08670 RNA5SP295-201ENST00000362655 121 ntBASIC3.7□□□□□ -1.82
VIMP08670 AP002088.1-201ENST00000382740 395 ntBASIC3.7□□□□□ -1.82
VIMP08670 GLRXP1-201ENST00000423261 334 ntBASIC3.7□□□□□ -1.82
VIMP08670 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VIMP08670 AL590103.1-201ENST00000434488 307 ntBASIC3.7□□□□□ -1.82
VIMP08670 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.7□□□□□ -1.82
VIMP08670 TBCAP1-201ENST00000436520 327 ntBASIC3.7□□□□□ -1.82
VIMP08670 MTND2P20-201ENST00000440805 661 ntBASIC3.7□□□□□ -1.82
VIMP08670 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.7□□□□□ -1.82
VIMP08670 AC006480.1-201ENST00000449887 378 ntBASIC3.7□□□□□ -1.82
VIMP08670 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.7□□□□□ -1.82
VIMP08670 AL445669.2-201ENST00000454425 421 ntBASIC3.7□□□□□ -1.82
VIMP08670 AC099563.1-201ENST00000456086 418 ntBASIC3.7□□□□□ -1.82
VIMP08670 AC026410.2-201ENST00000460281 156 ntBASIC3.7□□□□□ -1.82
VIMP08670 RN7SL442P-201ENST00000473804 320 ntBASIC3.7□□□□□ -1.82
VIMP08670 AC092185.1-201ENST00000491371 97 ntBASIC3.7□□□□□ -1.82
VIMP08670 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VIMP08670 AC108475.1-201ENST00000507880 950 ntBASIC3.7□□□□□ -1.82
VIMP08670 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.7□□□□□ -1.82
VIMP08670 RNU6-415P-201ENST00000516252 97 ntBASIC3.7□□□□□ -1.82
VIMP08670 RNU6-1073P-201ENST00000517182 106 ntBASIC3.7□□□□□ -1.82
VIMP08670 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.7□□□□□ -1.82
VIMP08670 AC109635.4-202ENST00000531666 412 ntBASIC3.7□□□□□ -1.82
VIMP08670 AC009643.1-201ENST00000532030 391 ntBASIC3.7□□□□□ -1.82
VIMP08670 AL121766.1-201ENST00000547436 487 ntBASIC3.7□□□□□ -1.82
VIMP08670 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.7□□□□□ -1.82
VIMP08670 EEF1B2P4-201ENST00000551398 348 ntBASIC3.7□□□□□ -1.82
VIMP08670 AL121603.1-201ENST00000553815 142 ntBASIC3.7□□□□□ -1.82
VIMP08670 MIR5096-201ENST00000583713 70 ntBASIC3.7□□□□□ -1.82
VIMP08670 MAGOH2P-202ENST00000584384 429 ntBASIC3.7□□□□□ -1.82
VIMP08670 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.7□□□□□ -1.82
VIMP08670 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.7□□□□□ -1.82
VIMP08670 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.7□□□□□ -1.82
VIMP08670 RPL23AP92-201ENST00000603609 255 ntBASIC3.7□□□□□ -1.82
VIMP08670 AC069209.1-201ENST00000619282 651 ntBASIC3.7□□□□□ -1.82
VIMP08670 AL078595.3-201ENST00000623815 1166 ntBASIC3.7□□□□□ -1.82
VIMP08670 AC010608.2-201ENST00000624830 470 ntBASIC3.7□□□□□ -1.82
VIMP08670 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.7□□□□□ -1.82
VIMP08670 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.7□□□□□ -1.82
VIMP08670 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
VIMP08670 AL732372.2-225ENST00000642124 456 ntBASIC3.7□□□□□ -1.82
VIMP08670 AC244517.1-201ENST00000606030 2086 ntBASIC3.7□□□□□ -1.82
VIMP08670 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VIMP08670 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VIMP08670 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.69□□□□□ -1.82
VIMP08670 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VIMP08670 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VIMP08670 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
VIMP08670 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.69□□□□□ -1.82
VIMP08670 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VIMP08670 SNORA58B-201ENST00000364259 136 ntBASIC3.69□□□□□ -1.82
VIMP08670 RNA5SP505-201ENST00000364748 108 ntBASIC3.69□□□□□ -1.82
VIMP08670 SNORA73.2-201ENST00000364946 201 ntBASIC3.69□□□□□ -1.82
VIMP08670 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
VIMP08670 RNU6-712P-201ENST00000410558 100 ntBASIC3.69□□□□□ -1.82
VIMP08670 RNU2-15P-201ENST00000410692 191 ntBASIC3.69□□□□□ -1.82
VIMP08670 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.69□□□□□ -1.82
VIMP08670 AC092447.6-201ENST00000414578 210 ntBASIC3.69□□□□□ -1.82
VIMP08670 RAD23BP2-201ENST00000416003 1207 ntBASIC3.69□□□□□ -1.82
VIMP08670 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.69□□□□□ -1.82
VIMP08670 PSMA6P3-201ENST00000428242 164 ntBASIC3.69□□□□□ -1.82
VIMP08670 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.69□□□□□ -1.82
VIMP08670 RPS24P6-201ENST00000452670 400 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms