Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC025627.2-201ENST00000576220 160 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 MIR4433B-201ENST00000581329 102 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AP001004.1-201ENST00000582468 324 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC083760.1-201ENST00000589621 670 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC008687.2-201ENST00000597865 520 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AL596327.1-201ENST00000603629 213 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AL353621.2-201ENST00000605340 133 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC103710.4-201ENST00000609301 899 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC091834.1-201ENST00000614543 472 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC243756.2-201ENST00000618406 463 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AL356321.1-201ENST00000621360 228 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 MIR7702-201ENST00000621931 59 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC116563.2-201ENST00000624751 535 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC120349.2-201ENST00000625002 298 ntBASIC4.85□□□□□ -1.63
HLA-DOAP06340 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DOAP06340 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HLA-DOAP06340 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 NOL8P1-201ENST00000508336 3529 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DOAP06340 MTCO1P14-201ENST00000441695 1559 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DOAP06340 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DOAP06340 GDI2P1-201ENST00000429312 1336 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 Y_RNA.582-201ENST00000391023 95 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DOAP06340 USP9YP6-201ENST00000413550 854 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 HMGB3P23-201ENST00000414981 585 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 RPL21P32-201ENST00000419877 477 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 USP9YP18-201ENST00000425912 695 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 BMS1P19-201ENST00000433925 393 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 RPS26P40-201ENST00000435209 294 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DOAP06340 Z99127.3-201ENST00000448158 395 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 RPL23AP15-201ENST00000450202 459 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 USP9YP34-201ENST00000453983 808 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 RPL37P3-201ENST00000456825 293 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 RPL21P129-201ENST00000491732 478 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 ARL2BPP6-201ENST00000512757 439 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 MTCO1P30-201ENST00000515244 580 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 AC008694.2-201ENST00000517591 306 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 AC023632.4-201ENST00000517783 191 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 SLC2A13P1-201ENST00000531560 322 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 AC100770.1-201ENST00000532310 322 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 SERPINE4P-201ENST00000554978 281 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 AC093519.1-201ENST00000566109 298 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 AC004067.1-201ENST00000608733 700 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 AL159169.3-201ENST00000608871 561 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 AP005264.7-201ENST00000625003 745 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 FAM157B-203ENST00000639350 358 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 AC073869.7-201ENST00000640874 297 ntBASIC4.84□□□□□ -1.63
HLA-DOAP06340 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DOAP06340 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DOAP06340 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
HLA-DOAP06340 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.84□□□□□ -1.64
HLA-DOAP06340 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
HLA-DOAP06340 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HLA-DOAP06340 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DOAP06340 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms