Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.35□□□□□ -2.03
SDCBPO00560 RPL7P52-201ENST00000449200 742 ntBASIC2.35□□□□□ -2.03
SDCBPO00560 SSXP4-201ENST00000451349 245 ntBASIC2.35□□□□□ -2.03
SDCBPO00560 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.35□□□□□ -2.03
SDCBPO00560 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.35□□□□□ -2.03
SDCBPO00560 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.35□□□□□ -2.03
SDCBPO00560 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.35□□□□□ -2.03
SDCBPO00560 AL049874.4-201ENST00000557593 255 ntBASIC2.35□□□□□ -2.03
SDCBPO00560 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.35□□□□□ -2.03
SDCBPO00560 AC090616.5-202ENST00000582111 297 ntBASIC2.35□□□□□ -2.03
SDCBPO00560 ZNF861P-201ENST00000588126 639 ntBASIC2.35□□□□□ -2.03
SDCBPO00560 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.35□□□□□ -2.03
SDCBPO00560 AC125494.3-201ENST00000602759 455 ntBASIC2.35□□□□□ -2.03
SDCBPO00560 AC012468.1-201ENST00000604888 430 ntBASIC2.35□□□□□ -2.03
SDCBPO00560 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.35□□□□□ -2.03
SDCBPO00560 ATP5A1P2-202ENST00000616464 443 ntBASIC2.35□□□□□ -2.03
SDCBPO00560 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SDCBPO00560 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC2.35□□□□□ -2.03
SDCBPO00560 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.35□□□□□ -2.03
SDCBPO00560 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.35□□□□□ -2.03
SDCBPO00560 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SDCBPO00560 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.34□□□□□ -2.03
SDCBPO00560 SNORA51.2-201ENST00000364595 132 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 RNU1-140P-201ENST00000365040 165 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SDCBPO00560 AL138880.1-201ENST00000405824 642 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SDCBPO00560 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.34□□□□□ -2.03
SDCBPO00560 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.34□□□□□ -2.03
SDCBPO00560 OR51AB1P-201ENST00000429046 620 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 PSMA2P3-201ENST00000429685 675 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.34□□□□□ -2.03
SDCBPO00560 AC008571.1-201ENST00000467232 300 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 AC126121.1-201ENST00000482313 553 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 HMGB1P38-201ENST00000490557 577 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 FABP5P6-201ENST00000510588 409 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 AC091826.1-201ENST00000514065 313 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.34□□□□□ -2.03
SDCBPO00560 HIGD1AP3-201ENST00000515857 278 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 RN7SKP57-201ENST00000517248 293 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.34□□□□□ -2.03
SDCBPO00560 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.34□□□□□ -2.03
SDCBPO00560 MTCYBP41-201ENST00000528913 1123 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 AC022080.3-201ENST00000544433 482 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.34□□□□□ -2.03
SDCBPO00560 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.34□□□□□ -2.03
SDCBPO00560 MTCO3P24-201ENST00000572729 782 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
SDCBPO00560 MIR5195-201ENST00000583555 115 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.34□□□□□ -2.03
SDCBPO00560 AC231759.1-201ENST00000616455 597 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
SDCBPO00560 AL136164.4-201ENST00000625013 2135 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 FAM157B-203ENST00000639350 358 ntBASIC2.34□□□□□ -2.03
SDCBPO00560 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SDCBPO00560 AP003122.5-201ENST00000527668 3766 ntBASIC2.34□□□□□ -2.04
SDCBPO00560 AL049737.1-201ENST00000413920 1403 ntBASIC2.34□□□□□ -2.04
SDCBPO00560 AC073346.2-201ENST00000624724 2058 ntBASIC2.33□□□□□ -2.04
SDCBPO00560 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SDCBPO00560 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SDCBPO00560 MTCO1P24-201ENST00000515438 1558 ntBASIC2.33□□□□□ -2.04
SDCBPO00560 MIR592-201ENST00000384959 97 ntBASIC2.33□□□□□ -2.04
SDCBPO00560 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.33□□□□□ -2.04
SDCBPO00560 NUP35P2-201ENST00000416748 943 ntBASIC2.33□□□□□ -2.04
SDCBPO00560 RPL7P10-201ENST00000417407 739 ntBASIC2.33□□□□□ -2.04
SDCBPO00560 RPL35AP12-201ENST00000425362 338 ntBASIC2.33□□□□□ -2.04
SDCBPO00560 AL121578.1-201ENST00000428051 892 ntBASIC2.33□□□□□ -2.04
SDCBPO00560 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.33□□□□□ -2.04
SDCBPO00560 AC127537.2-201ENST00000439258 465 ntBASIC2.33□□□□□ -2.04
SDCBPO00560 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.33□□□□□ -2.04
SDCBPO00560 AC140076.1-201ENST00000449897 361 ntBASIC2.33□□□□□ -2.04
SDCBPO00560 AL513343.1-201ENST00000451818 792 ntBASIC2.33□□□□□ -2.04
SDCBPO00560 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.33□□□□□ -2.04
SDCBPO00560 RNU6-491P-201ENST00000516099 110 ntBASIC2.33□□□□□ -2.04
SDCBPO00560 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.33□□□□□ -2.04
SDCBPO00560 AL121603.1-201ENST00000553815 142 ntBASIC2.33□□□□□ -2.04
SDCBPO00560 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.33□□□□□ -2.04
SDCBPO00560 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.33□□□□□ -2.04
SDCBPO00560 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.33□□□□□ -2.04
SDCBPO00560 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SDCBPO00560 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.33□□□□□ -2.04
SDCBPO00560 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
SDCBPO00560 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SDCBPO00560 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SDCBPO00560 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.33□□□□□ -2.04
SDCBPO00560 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
SDCBPO00560 FAM35BP-202ENST00000497389 3337 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SDCBPO00560 MIR26A1-201ENST00000362205 77 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 MTND4P13-201ENST00000402078 1023 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 EEF1A1P41-201ENST00000414667 207 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 AC023128.2-201ENST00000420880 1223 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.32□□□□□ -2.04
SDCBPO00560 AL160175.1-201ENST00000428124 247 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 RPL21P40-201ENST00000428586 483 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 AC104332.2-201ENST00000429959 156 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SDCBPO00560 AL513043.1-201ENST00000439124 535 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 RSL24D1P2-201ENST00000445584 366 ntBASIC2.32□□□□□ -2.04
SDCBPO00560 NECAP1P2-201ENST00000455668 727 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms