Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AL137843.1-201ENST00000605078 385 ntBASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AL451074.6-201ENST00000608512 729 ntBASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CPSF4LA6NMK7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CPSF4LA6NMK7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CPSF4LA6NMK7 AC244517.1-201ENST00000606030 2086 ntBASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 AL591416.1-201ENST00000404015 867 ntBASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 AC009963.1-201ENST00000417265 157 ntBASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 NEK4P1-201ENST00000433383 879 ntBASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 RPL23AP20-201ENST00000447965 421 ntBASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 SNRPGP3-201ENST00000469405 227 ntBASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 AC008565.1-201ENST00000509046 885 ntBASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 TTC39CP1-201ENST00000512513 755 ntBASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 SNORA31.11-201ENST00000516528 139 ntBASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 MTCYBP20-201ENST00000524239 1129 ntBASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 AC007336.1-201ENST00000576365 3828 ntBASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 AL359535.1-201ENST00000612100 1087 ntBASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 AC114546.3-201ENST00000623582 1734 ntBASIC2.08□□□□□ -2.08
CPSF4LA6NMK7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 U3.26-201ENST00000391236 204 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 RPS4XP8-201ENST00000402039 771 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 DHFRP5-201ENST00000406944 564 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 RANP7-201ENST00000418085 644 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 MTND4LP13-201ENST00000425022 298 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 AC129850.1-201ENST00000436203 508 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 RPL7P59-201ENST00000447700 943 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 RPL7P31-201ENST00000450192 724 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 AL109741.2-201ENST00000455561 343 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 RPS26P21-201ENST00000475397 348 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 AC037198.2-201ENST00000478845 733 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 AC022069.1-201ENST00000582910 658 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 MIR5007-201ENST00000583098 95 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 AC010928.3-201ENST00000587712 541 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 NRBF2P5-201ENST00000603087 788 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 SNORA35B-201ENST00000607417 129 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 AC009159.1-201ENST00000618386 642 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 Z99496.1-201ENST00000469424 1477 ntBASIC2.07□□□□□ -2.08
CPSF4LA6NMK7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 AC107081.1-201ENST00000414975 361 ntBASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 FNDC3CP-201ENST00000420795 1155 ntBASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 AC018634.1-201ENST00000437554 401 ntBASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 AC084757.1-201ENST00000559987 490 ntBASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 BNIP3P22-201ENST00000593399 556 ntBASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 RPL23AP78-201ENST00000599928 470 ntBASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 DUXAP3-201ENST00000603616 594 ntBASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 AC007998.5-201ENST00000622938 237 ntBASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 CR392039.4-201ENST00000624968 501 ntBASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 AL049780.3-201ENST00000624612 1583 ntBASIC2.06□□□□□ -2.08
CPSF4LA6NMK7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 METTL21EP-201ENST00000298105 713 ntBASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 U3.12-201ENST00000364498 214 ntBASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 SNORA80E-201ENST00000384744 137 ntBASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 AL356057.1-202ENST00000402263 756 ntBASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 ATF1P1-201ENST00000406040 927 ntBASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms