Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.91□□□□□ -1.94
SCN10AQ9Y5Y9 AC103710.3-201ENST00000608157 948 ntBASIC2.91□□□□□ -1.94
SCN10AQ9Y5Y9 AC010338.1-201ENST00000621823 717 ntBASIC2.91□□□□□ -1.94
SCN10AQ9Y5Y9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
SCN10AQ9Y5Y9 AP001486.2-201ENST00000561652 5113 ntBASIC2.9□□□□□ -1.94
SCN10AQ9Y5Y9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 RNA5SP189-201ENST00000364920 115 ntBASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 RPS4XP7-201ENST00000406274 780 ntBASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 RPL23AP15-201ENST00000450202 459 ntBASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 RNU7-170P-201ENST00000459303 61 ntBASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 AC008549.1-201ENST00000512900 643 ntBASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 AC007621.1-201ENST00000604544 437 ntBASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 AC018754.1-201ENST00000607486 925 ntBASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 AC112503.1-201ENST00000608436 391 ntBASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 AC005046.1-201ENST00000608515 625 ntBASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SCN10AQ9Y5Y9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 AP001148.1-201ENST00000624124 2359 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 MIR887-201ENST00000401258 79 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 VDAC1P3-201ENST00000434069 851 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 RPS20P32-201ENST00000456044 356 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 AC108120.2-201ENST00000512973 294 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 MTCO1P30-201ENST00000515244 580 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 RN7SKP82-201ENST00000516786 223 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 AP002770.2-201ENST00000543613 532 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 MIR4524B-201ENST00000581569 115 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 MIR3605-201ENST00000583214 100 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 MIR4635-201ENST00000583759 79 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 MIR7973-1-201ENST00000614683 76 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 AC025034.2-201ENST00000623264 286 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 MIR320B1-201ENST00000390209 79 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 BTG3P1-201ENST00000435859 716 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 AL513124.1-201ENST00000450410 614 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 TPMTP4-201ENST00000450749 678 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 CEACAMP4-201ENST00000457676 421 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 CR381653.2-201ENST00000624041 768 ntBASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN10AQ9Y5Y9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.88□□□□□ -1.95
SCN10AQ9Y5Y9 RNA5SP167-201ENST00000365461 116 ntBASIC2.88□□□□□ -1.95
SCN10AQ9Y5Y9 NPM1P11-201ENST00000417106 855 ntBASIC2.88□□□□□ -1.95
SCN10AQ9Y5Y9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SCN10AQ9Y5Y9 RPS24P8-201ENST00000431490 402 ntBASIC2.88□□□□□ -1.95
SCN10AQ9Y5Y9 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.88□□□□□ -1.95
SCN10AQ9Y5Y9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SCN10AQ9Y5Y9 AC078785.3-201ENST00000476607 425 ntBASIC2.88□□□□□ -1.95
SCN10AQ9Y5Y9 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN10AQ9Y5Y9 AC113398.2-201ENST00000507630 558 ntBASIC2.88□□□□□ -1.95
SCN10AQ9Y5Y9 AP004242.1-201ENST00000533701 349 ntBASIC2.88□□□□□ -1.95
SCN10AQ9Y5Y9 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.88□□□□□ -1.95
SCN10AQ9Y5Y9 AC008277.2-201ENST00000605196 797 ntBASIC2.88□□□□□ -1.95
SCN10AQ9Y5Y9 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN10AQ9Y5Y9 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SCN10AQ9Y5Y9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SCN10AQ9Y5Y9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 AL031736.2-201ENST00000426573 787 ntBASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 MTCYBP14-201ENST00000457471 715 ntBASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 AC093663.2-201ENST00000484625 313 ntBASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 OR8L1P-201ENST00000534005 955 ntBASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 BMS1P7-201ENST00000602440 1052 ntBASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 AC007687.1-201ENST00000602704 304 ntBASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 AC011472.4-201ENST00000615848 491 ntBASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 AC021755.1-201ENST00000559747 1447 ntBASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 MIR518C-201ENST00000384822 101 ntBASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 MIR592-201ENST00000384959 97 ntBASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 AC007390.1-201ENST00000415722 356 ntBASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 AL451074.5-201ENST00000415894 435 ntBASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN10AQ9Y5Y9 OR5H4P-201ENST00000510851 923 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms