Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 NF1P3-201ENST00000457709 450 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AC108941.1-201ENST00000502853 530 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 HMGB3P16-201ENST00000508037 287 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 PAICSP4-201ENST00000517543 1253 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AC027309.2-201ENST00000520566 192 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AC124947.2-202ENST00000552735 133 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 MIR3138-201ENST00000585238 82 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AC020910.2-201ENST00000603635 610 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AC091488.1-201ENST00000604239 660 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AC069304.2-201ENST00000605154 435 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AC010680.4-201ENST00000605334 543 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AL139089.1-201ENST00000620372 975 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AC138649.3-201ENST00000622154 254 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 EIF2AP4-201ENST00000424793 1781 ntBASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CTDP1Q9Y5B0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AL731532.2-201ENST00000623542 1953 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 OR5P1P-201ENST00000299512 925 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 RNU6-462P-201ENST00000362659 105 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 RNU6-216P-201ENST00000363282 104 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 RNU6-297P-201ENST00000384636 107 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AC092634.6-201ENST00000418558 192 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AC073335.1-201ENST00000427776 363 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AC004975.1-201ENST00000428733 208 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 VDAC1P6-201ENST00000430062 855 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 RPL23AP25-201ENST00000430973 463 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AL022238.1-201ENST00000442557 355 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AC073587.1-201ENST00000447093 876 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 RPL26P28-201ENST00000451325 435 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AL033528.1-201ENST00000453780 140 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AL672167.3-201ENST00000465951 960 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 MTCO1P35-201ENST00000515270 228 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 RNA5SP216-201ENST00000516111 123 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 IGKV2-36-201ENST00000519999 223 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 RN7SL435P-201ENST00000584418 282 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AC008966.2-201ENST00000606157 453 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 AC026634.1-201ENST00000634369 198 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 SALL4P2-201ENST00000423288 2910 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 CPHL1P-201ENST00000461341 3407 ntBASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTDP1Q9Y5B0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 RNU6-797P-201ENST00000363101 109 ntBASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 RNU6-114P-201ENST00000384704 105 ntBASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 RPL23AP26-201ENST00000412728 464 ntBASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 FCF1P2-201ENST00000415284 583 ntBASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 AC083875.1-201ENST00000419509 405 ntBASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 AL953862.1-201ENST00000423016 168 ntBASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 SLC31A1P1-201ENST00000451221 567 ntBASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 AC009963.2-201ENST00000453431 138 ntBASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 AC105137.1-201ENST00000484355 562 ntBASIC5.16□□□□□ -1.58
CTDP1Q9Y5B0 LARP1BP2-201ENST00000486594 519 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms