Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 MIR4446-201ENST00000578505 67 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 AC006023.2-201ENST00000609916 167 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 AC096577.2-201ENST00000611455 153 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 AL390240.1-201ENST00000612950 384 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 AC091046.2-201ENST00000620775 665 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 MAPK10-322ENST00000641485 4530 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 TAB3P1-202ENST00000452645 1634 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 MIR422A-201ENST00000362286 90 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 RNU6-600P-201ENST00000362524 99 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 RNA5SP387-201ENST00000364226 106 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 MIR142-201ENST00000384835 87 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 FO393413.1-201ENST00000402892 195 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 AL589994.1-201ENST00000404962 340 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 SNORA11C-201ENST00000408532 129 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 AC093084.1-201ENST00000424233 687 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 RPS12P2-201ENST00000439728 269 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 RPL17P49-201ENST00000443728 411 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 AL353898.1-201ENST00000444055 238 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 RPL7P52-201ENST00000449200 742 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 CACYBPP2-201ENST00000453625 678 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 PANCR-202ENST00000513690 448 ntTSL 2 BASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 SNORA31.11-201ENST00000516528 139 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 CCNG2P1-201ENST00000549521 1000 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 AC007954.1-201ENST00000554198 494 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 MIR5092-201ENST00000583139 88 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 AC073387.2-201ENST00000604797 784 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 AC007179.3-201ENST00000604976 235 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 HSPE1P14-201ENST00000605812 302 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 AC112503.1-201ENST00000608436 391 ntBASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC1.84□□□□□ -2.11
UBE2D4Q9Y2X8 AC073346.2-201ENST00000624724 2058 ntBASIC1.84□□□□□ -2.12
UBE2D4Q9Y2X8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
UBE2D4Q9Y2X8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 SNORA51.2-201ENST00000364595 132 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 RNA5SP105-201ENST00000391123 113 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 ARF4P3-201ENST00000397387 509 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 AL138885.1-201ENST00000405921 675 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 YPEL5P1-201ENST00000419731 367 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 AC048351.1-201ENST00000420064 602 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 RPL21P112-201ENST00000434403 463 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 snoU13.24-201ENST00000458998 104 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 HMGB1P25-201ENST00000468402 607 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 AC005912.1-201ENST00000495392 255 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 RPS27P27-201ENST00000498779 255 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 HMGB1P3-201ENST00000502802 616 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 MIR5195-201ENST00000583555 115 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 HNRNPDLP4-201ENST00000605144 301 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 AC006249.1-201ENST00000621223 471 ntBASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
UBE2D4Q9Y2X8 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms