Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 MAL2-208ENST00000523307 556 ntTSL 4 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 HSPE1P2-201ENST00000554777 306 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 AC068446.3-201ENST00000555285 382 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 AC018809.2-201ENST00000602436 3823 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 AC126915.2-201ENST00000610957 190 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 RNA5SP439-201ENST00000617595 124 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 RNU6-1066P-201ENST00000363573 105 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 RNU6-48P-201ENST00000384161 107 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 RNU6-493P-201ENST00000391321 108 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 BTBD10P2-201ENST00000404779 676 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 COX6CP17-201ENST00000421389 185 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 AL590762.4-201ENST00000425885 253 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 GPR143P-201ENST00000434155 205 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 SNORD125-201ENST00000459538 96 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 RPS23P2-201ENST00000463671 415 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 GMFBP1-201ENST00000467831 427 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 IGLV3-24-201ENST00000517477 197 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 IGHV3-63-201ENST00000518422 341 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 AC025884.1-201ENST00000556034 378 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 GLUD1P4-201ENST00000590914 418 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 ADAM24P-201ENST00000398655 2101 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 KPNA2P1-201ENST00000458289 1591 ntBASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDZRN3Q9UPQ7 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 HSPA8P18-201ENST00000439846 1928 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 RPS26P13-201ENST00000419030 330 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AL139396.1-201ENST00000421137 167 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AC006548.1-201ENST00000427470 102 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 DNAJC19P8-201ENST00000452887 259 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AC083899.1-201ENST00000454465 3819 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AC108161.1-201ENST00000461060 402 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AC016687.1-201ENST00000482574 353 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 SNRPCP2-201ENST00000504370 475 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 RNU6-583P-201ENST00000516012 92 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 RNU6-475P-201ENST00000516073 104 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 RNU6-1261P-201ENST00000517194 104 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AC090572.1-201ENST00000519251 160 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AC012433.1-201ENST00000588916 398 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 MZT1P2-201ENST00000604387 248 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 MIR6820-201ENST00000611508 62 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms