Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 UBE2V2P1-201ENST00000434717 398 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 VN1R48P-201ENST00000448149 1036 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.58□□□□□ -2
CCDC88CQ9P219 RPL23AP11-201ENST00000475260 469 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 TMEM248P1-201ENST00000510579 951 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.58□□□□□ -2
CCDC88CQ9P219 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CCDC88CQ9P219 AC243972.3-201ENST00000539655 198 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.58□□□□□ -2
CCDC88CQ9P219 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.58□□□□□ -2
CCDC88CQ9P219 AC009163.5-201ENST00000575421 637 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 VN1R84P-201ENST00000593697 235 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 AL590240.3-201ENST00000621416 943 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 AC009950.2-201ENST00000636548 183 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 AC025125.1-201ENST00000624743 1922 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.58□□□□□ -2
CCDC88CQ9P219 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 FAM35CP-201ENST00000554755 2470 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.58□□□□□ -2
CCDC88CQ9P219 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC88CQ9P219 AC240504.1-201ENST00000395709 845 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 SAR1AP4-201ENST00000429225 591 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.58□□□□□ -2
CCDC88CQ9P219 AC008571.1-201ENST00000467232 300 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.58□□□□□ -2
CCDC88CQ9P219 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.58□□□□□ -2
CCDC88CQ9P219 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.58□□□□□ -2
CCDC88CQ9P219 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.58□□□□□ -2
CCDC88CQ9P219 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC88CQ9P219 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.58□□□□□ -2
CCDC88CQ9P219 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.58□□□□□ -2
CCDC88CQ9P219 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.58□□□□□ -2
CCDC88CQ9P219 ZNF192P1-203ENST00000565888 810 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.58□□□□□ -2
CCDC88CQ9P219 AC010615.3-201ENST00000597319 394 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 AL590808.1-201ENST00000618696 141 ntBASIC2.58□□□□□ -2
CCDC88CQ9P219 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.57□□□□□ -2
CCDC88CQ9P219 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.57□□□□□ -2
CCDC88CQ9P219 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CCDC88CQ9P219 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.57□□□□□ -2
CCDC88CQ9P219 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC88CQ9P219 SNORA67.4-201ENST00000384688 142 ntBASIC2.57□□□□□ -2
CCDC88CQ9P219 MIR34A-201ENST00000385130 110 ntBASIC2.57□□□□□ -2
CCDC88CQ9P219 CCNB2P1-201ENST00000399411 1150 ntBASIC2.57□□□□□ -2
CCDC88CQ9P219 RNU2-37P-201ENST00000410695 177 ntBASIC2.57□□□□□ -2
CCDC88CQ9P219 AL096701.2-201ENST00000416920 238 ntBASIC2.57□□□□□ -2
CCDC88CQ9P219 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.57□□□□□ -2
CCDC88CQ9P219 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.57□□□□□ -2
CCDC88CQ9P219 NECAP1P2-201ENST00000455668 727 ntBASIC2.57□□□□□ -2
CCDC88CQ9P219 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.57□□□□□ -2
CCDC88CQ9P219 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.57□□□□□ -2
CCDC88CQ9P219 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.57□□□□□ -2
CCDC88CQ9P219 AC108120.2-201ENST00000512973 294 ntBASIC2.57□□□□□ -2
CCDC88CQ9P219 MTCO1P30-201ENST00000515244 580 ntBASIC2.57□□□□□ -2
CCDC88CQ9P219 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.57□□□□□ -2
CCDC88CQ9P219 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.57□□□□□ -2
CCDC88CQ9P219 AC022884.3-201ENST00000579571 248 ntBASIC2.57□□□□□ -2
CCDC88CQ9P219 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.57□□□□□ -2
CCDC88CQ9P219 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.57□□□□□ -2
CCDC88CQ9P219 AC116312.1-201ENST00000606841 314 ntBASIC2.57□□□□□ -2
CCDC88CQ9P219 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.57□□□□□ -2
CCDC88CQ9P219 AC005156.1-201ENST00000613371 573 ntBASIC2.57□□□□□ -2
CCDC88CQ9P219 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.57□□□□□ -2
CCDC88CQ9P219 RMST_5.1-201ENST00000618704 126 ntBASIC2.57□□□□□ -2
CCDC88CQ9P219 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.57□□□□□ -2
CCDC88CQ9P219 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC88CQ9P219 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.56□□□□□ -2
CCDC88CQ9P219 AC007563.3-201ENST00000433233 371 ntBASIC2.56□□□□□ -2
CCDC88CQ9P219 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.56□□□□□ -2
CCDC88CQ9P219 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.56□□□□□ -2
CCDC88CQ9P219 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.56□□□□□ -2
CCDC88CQ9P219 HMGB3P30-201ENST00000457863 606 ntBASIC2.56□□□□□ -2
CCDC88CQ9P219 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.56□□□□□ -2
CCDC88CQ9P219 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.56□□□□□ -2
CCDC88CQ9P219 RPL7P20-201ENST00000520308 745 ntBASIC2.56□□□□□ -2
CCDC88CQ9P219 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.56□□□□□ -2
CCDC88CQ9P219 EIF4EP5-201ENST00000528228 640 ntBASIC2.56□□□□□ -2
CCDC88CQ9P219 AC007536.1-201ENST00000533382 349 ntBASIC2.56□□□□□ -2
CCDC88CQ9P219 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.56□□□□□ -2
CCDC88CQ9P219 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.56□□□□□ -2
CCDC88CQ9P219 MIR4458-201ENST00000578872 75 ntBASIC2.56□□□□□ -2
CCDC88CQ9P219 MIR548Y-201ENST00000582739 110 ntBASIC2.56□□□□□ -2
CCDC88CQ9P219 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC88CQ9P219 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CCDC88CQ9P219 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC88CQ9P219 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC88CQ9P219 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC88CQ9P219 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC88CQ9P219 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC88CQ9P219 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC88CQ9P219 DYNLT3P1-201ENST00000378574 347 ntBASIC2.56□□□□□ -2
CCDC88CQ9P219 RNU6-301P-201ENST00000384277 107 ntBASIC2.56□□□□□ -2
CCDC88CQ9P219 AL139039.1-201ENST00000401900 692 ntBASIC2.56□□□□□ -2
CCDC88CQ9P219 AL451074.5-201ENST00000415894 435 ntBASIC2.56□□□□□ -2
CCDC88CQ9P219 YWHAZP7-201ENST00000436906 631 ntBASIC2.56□□□□□ -2
CCDC88CQ9P219 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.56□□□□□ -2
CCDC88CQ9P219 AC008280.2-201ENST00000455473 307 ntBASIC2.56□□□□□ -2
CCDC88CQ9P219 AC104629.2-201ENST00000468627 598 ntBASIC2.56□□□□□ -2
CCDC88CQ9P219 AP000926.3-201ENST00000497201 299 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms