Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.4□□□□□ -2.03
NKX6-2Q9C056 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AL035407.2-201ENST00000454090 378 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 snoU13.24-201ENST00000458998 104 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 HMGB1P25-201ENST00000468402 607 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC103975.1-201ENST00000482506 483 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC004062.1-201ENST00000509926 645 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 MTCO1P35-201ENST00000515270 228 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 RN7SKP122-201ENST00000515923 296 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC083923.1-201ENST00000523708 376 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC125611.2-201ENST00000551907 647 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.4□□□□□ -2.03
NKX6-2Q9C056 SNORD84-203ENST00000584275 78 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC017100.2-201ENST00000584628 355 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AL669831.4-202ENST00000590817 238 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC125494.3-201ENST00000602759 455 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC135178.6-201ENST00000605314 398 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 HSPE1P14-201ENST00000605812 302 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC005972.3-201ENST00000606304 481 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC069200.1-201ENST00000609511 323 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC025016.1-201ENST00000616746 682 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 STMN1P1-201ENST00000617809 440 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC090617.9-201ENST00000623751 147 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AL109659.3-201ENST00000624985 950 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC017104.5-201ENST00000637647 639 ntBASIC2.4□□□□□ -2.03
NKX6-2Q9C056 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NKX6-2Q9C056 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.4□□□□□ -2.03
NKX6-2Q9C056 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
NKX6-2Q9C056 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 ZNF734P-201ENST00000419494 1534 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC110754.1-201ENST00000399740 601 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 SSXP10-201ENST00000402595 565 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 RPL7P25-201ENST00000404151 721 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 RNU6-272P-201ENST00000411028 104 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC092745.2-202ENST00000411880 369 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC097713.2-201ENST00000430199 356 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC122718.1-201ENST00000439448 744 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 DNAJC19P8-201ENST00000452887 259 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AL109741.2-201ENST00000455561 343 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 PRDX3P4-201ENST00000470828 747 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC017015.1-201ENST00000477387 286 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 RNF138P1-201ENST00000502765 546 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 ZNF415P1-201ENST00000582279 1166 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 MIR4276-201ENST00000584832 70 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC022916.3-201ENST00000592961 742 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC025588.3-201ENST00000604182 274 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC010338.1-201ENST00000621823 717 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC024595.1-201ENST00000623088 387 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC092608.3-201ENST00000625017 386 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AP002907.1-201ENST00000606361 1430 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AC046144.1-201ENST00000478559 1853 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 AL645568.2-201ENST00000432815 1337 ntBASIC2.39□□□□□ -2.03
NKX6-2Q9C056 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
NKX6-2Q9C056 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
NKX6-2Q9C056 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
NKX6-2Q9C056 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.38□□□□□ -2.03
NKX6-2Q9C056 GABRG2-229ENST00000641017 3628 ntBASIC2.38□□□□□ -2.03
NKX6-2Q9C056 ENSAP3-201ENST00000312710 333 ntBASIC2.38□□□□□ -2.03
NKX6-2Q9C056 MIR6073-201ENST00000352083 89 ntBASIC2.38□□□□□ -2.03
NKX6-2Q9C056 RNU6-252P-201ENST00000363232 107 ntBASIC2.38□□□□□ -2.03
NKX6-2Q9C056 SNORD56.5-201ENST00000364281 72 ntBASIC2.38□□□□□ -2.03
NKX6-2Q9C056 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NKX6-2Q9C056 RNU1-138P-201ENST00000384093 164 ntBASIC2.38□□□□□ -2.03
NKX6-2Q9C056 RNU6-1226P-201ENST00000384317 107 ntBASIC2.38□□□□□ -2.03
NKX6-2Q9C056 SNORA51.12-201ENST00000384448 134 ntBASIC2.38□□□□□ -2.03
NKX6-2Q9C056 SNORD3H-201ENST00000384486 214 ntBASIC2.38□□□□□ -2.03
NKX6-2Q9C056 U8.11-201ENST00000384699 133 ntBASIC2.38□□□□□ -2.03
NKX6-2Q9C056 U8.12-201ENST00000384701 133 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms