Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CCDC60Q8IWA6 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.84□□□□□ -1.79
CCDC60Q8IWA6 AC006065.5-201ENST00000623427 349 ntBASIC3.84□□□□□ -1.79
CCDC60Q8IWA6 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC60Q8IWA6 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CCDC60Q8IWA6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC60Q8IWA6 AL133383.2-201ENST00000622958 2336 ntBASIC3.84□□□□□ -1.79
CCDC60Q8IWA6 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC60Q8IWA6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC60Q8IWA6 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.84□□□□□ -1.8
CCDC60Q8IWA6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.84□□□□□ -1.8
CCDC60Q8IWA6 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC60Q8IWA6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC60Q8IWA6 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC60Q8IWA6 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
CCDC60Q8IWA6 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 RNA5SP197-201ENST00000363357 119 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 RNU4-68P-201ENST00000364314 141 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 RNA5SP235-201ENST00000365411 114 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 RNA5SP167-201ENST00000365461 116 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 SNORA70E-201ENST00000384492 135 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 SNORD116-23-201ENST00000384645 92 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 MIR1183-201ENST00000408856 89 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 RNU2-21P-201ENST00000410368 188 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC009237.2-201ENST00000421358 284 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC233981.1-201ENST00000423224 461 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 NANOGP2-201ENST00000435391 727 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC092393.1-201ENST00000439625 742 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 RPS20P32-201ENST00000456044 356 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 BX510359.1-201ENST00000456973 237 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 HMGB3P30-201ENST00000457863 606 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC005410.1-202ENST00000460347 485 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AP000873.1-201ENST00000463987 400 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC087385.1-201ENST00000475062 312 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 RPL21P13-201ENST00000488305 481 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC134050.1-201ENST00000495088 933 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 SNX5P1-201ENST00000505757 1041 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AP001372.4-201ENST00000524889 472 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC011611.1-201ENST00000552179 197 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AL121576.1-201ENST00000556055 276 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AGGF1P8-201ENST00000562979 1000 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 MIR4644-201ENST00000579929 84 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC015688.2-201ENST00000584523 262 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AL355816.2-201ENST00000610049 647 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AL442067.2-201ENST00000614033 363 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC022149.2-201ENST00000621061 203 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC244205.2-202ENST00000635781 342 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC068620.4-201ENST00000636730 1182 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 LINC02211-204ENST00000642024 1070 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AC099786.3-201ENST00000565735 1410 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 Z99496.1-201ENST00000469424 1477 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 AP005901.5-201ENST00000545779 1796 ntBASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CCDC60Q8IWA6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 AP000568.1-201ENST00000282964 442 ntBASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 snoZ40.1-201ENST00000364540 72 ntBASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 RNU6-356P-201ENST00000384140 107 ntBASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 SNORA9-201ENST00000384215 133 ntBASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 MIR217-201ENST00000384817 110 ntBASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 SNORA40.2-201ENST00000390847 128 ntBASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 MTCO3P31-201ENST00000405526 789 ntBASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 AL136133.1-201ENST00000413694 376 ntBASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 OR1AA1P-201ENST00000419597 916 ntBASIC3.82□□□□□ -1.8
CCDC60Q8IWA6 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms