Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 AC018529.3-201ENST00000624212 2254 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 Y_RNA.18-201ENST00000362461 102 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 RNU6-1200P-201ENST00000384162 107 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 MIR491-201ENST00000384877 84 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 MIR34B-201ENST00000385076 84 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 SNORD66.1-201ENST00000391230 76 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 MIR1179-201ENST00000408703 91 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 AC068533.1-201ENST00000418542 415 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 AC083875.1-201ENST00000419509 405 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 TBCAP1-201ENST00000436520 327 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 SNRPEP7-201ENST00000438350 220 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 AC127537.2-201ENST00000439258 465 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 AL591503.2-201ENST00000442314 1005 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 RPS4XP4-201ENST00000443195 763 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 MTCYBP3-201ENST00000445588 1137 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 PDSS1P2-201ENST00000449397 678 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 PPBPP1-201ENST00000510807 373 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 MRPS33P3-201ENST00000513456 322 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 AC006499.2-201ENST00000513470 337 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 RNU1-95P-201ENST00000516357 160 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 SNORA74D-201ENST00000516404 141 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 RNU1-128P-201ENST00000516704 160 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 AC022861.1-201ENST00000522981 663 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 DEFB109D-201ENST00000529497 240 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 AC008015.1-201ENST00000555505 465 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 CYCSP2-201ENST00000558168 301 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 MIR3200-201ENST00000580767 85 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 AC083899.3-201ENST00000603413 594 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 AL596327.1-201ENST00000603629 213 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 AL360219.1-201ENST00000610230 366 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 FP236240.3-201ENST00000623061 327 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.43□□□□□ -1.7
HERC6Q8IVU3 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.43□□□□□ -1.7
HERC6Q8IVU3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AC090337.1-201ENST00000579651 2074 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 RNA5SP52-201ENST00000362448 134 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 RNU6-339P-201ENST00000384310 107 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 RBMY1KP-201ENST00000423480 476 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 HSPE1P28-201ENST00000443139 211 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 FGF7P3-201ENST00000454645 303 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AP000563.1-201ENST00000490865 758 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 RN7SL323P-201ENST00000494712 295 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 TMEM251P1-201ENST00000503717 318 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 RPF2P2-201ENST00000504693 896 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AC010486.2-201ENST00000505572 483 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 TMEM248P1-201ENST00000510579 951 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AL139174.1-201ENST00000531489 886 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 CYCSP30-201ENST00000546447 172 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 LARP7P2-201ENST00000575306 125 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AL353778.1-201ENST00000603149 408 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 DUXAP11-201ENST00000603858 526 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 MIR6868-201ENST00000611215 58 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AL138721.1-201ENST00000616756 179 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AL603755.1-201ENST00000619504 163 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 AC006065.5-201ENST00000623427 349 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 OR4G11P-202ENST00000642116 1414 ntBASIC4.42□□□□□ -1.7
HERC6Q8IVU3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms