Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 PGBD4P8-201ENST00000412993 562 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AL356095.1-201ENST00000417217 199 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 TIMM9P2-201ENST00000419324 266 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AL358472.1-201ENST00000431295 329 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC092427.1-201ENST00000439177 601 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 OR9M1P-201ENST00000459641 921 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 MTND2P14-201ENST00000482139 351 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 NIPA2P2-201ENST00000496376 1083 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC108078.3-201ENST00000502633 489 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC025554.1-201ENST00000505641 188 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC002456.2-201ENST00000509356 380 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC010587.2-201ENST00000511727 448 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 MTCO1P35-201ENST00000515270 228 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 RNU7-143P-201ENST00000516781 65 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 IGKV2-38-201ENST00000517443 247 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC007224.1-201ENST00000564410 144 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC025627.2-201ENST00000576220 160 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 MIR4474-201ENST00000579189 78 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC244505.7-201ENST00000599675 272 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC055876.5-201ENST00000605667 259 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 TUSC7.1-201ENST00000610969 165 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 MIR7151-201ENST00000617477 60 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AC009159.2-201ENST00000617603 606 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AP000484.1-201ENST00000620067 1252 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 AL360181.4-201ENST00000621752 134 ntBASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NUP54Q7Z3B4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AL390862.1-201ENST00000635467 1469 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 RPL7P26-201ENST00000333817 754 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 SNORD113-6-201ENST00000363345 75 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 RNA5SP130-201ENST00000364431 114 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 RN7SKP227-201ENST00000364445 330 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 RNU6-157P-201ENST00000383957 107 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AC119751.3-201ENST00000399720 670 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 HSPE1P12-201ENST00000412576 301 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 TPT1P2-201ENST00000413105 503 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AC006960.1-201ENST00000419980 153 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 RPL21P109-201ENST00000422213 475 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 MTND3P1-201ENST00000441336 220 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 RPL39P6-201ENST00000448289 150 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 MTND2P19-201ENST00000449129 1012 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 RPL18AP17-201ENST00000455326 198 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 ANKRD26P4-201ENST00000455755 950 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 snoU109.4-201ENST00000458953 143 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 RPL7P18-201ENST00000478965 734 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AC104090.1-201ENST00000506341 1171 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 MIR5684-201ENST00000585074 65 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 XIAPP1-201ENST00000603162 600 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AC008638.3-201ENST00000603341 463 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 MIR6867-201ENST00000610636 67 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AL390240.1-201ENST00000612950 384 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AC233309.1-201ENST00000619522 751 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AC103858.2-201ENST00000621471 543 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 MIR1322-201ENST00000638013 71 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 MAPK10-373ENST00000641983 6772 ntBASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NUP54Q7Z3B4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms