Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL352979.3-201ENST00000553515 247 ntBASIC3.47□□□□□ -1.85
CX3CL1P78423 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CX3CL1P78423 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.47□□□□□ -1.85
CX3CL1P78423 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.47□□□□□ -1.85
CX3CL1P78423 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CX3CL1P78423 AC090615.1-201ENST00000577519 154 ntBASIC3.47□□□□□ -1.85
CX3CL1P78423 MIR544B-201ENST00000582372 78 ntBASIC3.47□□□□□ -1.85
CX3CL1P78423 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.47□□□□□ -1.85
CX3CL1P78423 AL590229.1-201ENST00000603497 542 ntBASIC3.47□□□□□ -1.85
CX3CL1P78423 AC055876.5-201ENST00000605667 259 ntBASIC3.47□□□□□ -1.85
CX3CL1P78423 AC092354.1-201ENST00000606057 376 ntBASIC3.47□□□□□ -1.85
CX3CL1P78423 OR2AS2P-201ENST00000606902 342 ntBASIC3.47□□□□□ -1.85
CX3CL1P78423 AC011816.2-201ENST00000607089 556 ntBASIC3.47□□□□□ -1.85
CX3CL1P78423 AC090948.1-201ENST00000607464 549 ntBASIC3.47□□□□□ -1.85
CX3CL1P78423 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CX3CL1P78423 uc_338.13-201ENST00000618243 179 ntBASIC3.47□□□□□ -1.85
CX3CL1P78423 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.47□□□□□ -1.85
CX3CL1P78423 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CX3CL1P78423 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CX3CL1P78423 MAPK10-253ENST00000641010 4072 ntBASIC3.47□□□□□ -1.85
CX3CL1P78423 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CX3CL1P78423 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CX3CL1P78423 ZNF833P-201ENST00000424938 1494 ntBASIC3.47□□□□□ -1.85
CX3CL1P78423 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.47□□□□□ -1.85
CX3CL1P78423 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CX3CL1P78423 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
CX3CL1P78423 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
CX3CL1P78423 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.46□□□□□ -1.85
CX3CL1P78423 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CX3CL1P78423 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CX3CL1P78423 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CX3CL1P78423 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AL161781.1-201ENST00000354277 403 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 MIR331-201ENST00000362302 94 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 Y_RNA.97-201ENST00000363094 102 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 RNA5SP447-201ENST00000363749 119 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 RNU6-501P-201ENST00000364072 100 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 RNA5SP175-201ENST00000364275 119 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.46□□□□□ -1.86
CX3CL1P78423 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.46□□□□□ -1.86
CX3CL1P78423 SNORD116-1-201ENST00000384335 95 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 SNORA26.8-201ENST00000391306 124 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 RN7SKP177-201ENST00000410567 355 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 MIR1911-201ENST00000410783 80 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.46□□□□□ -1.86
CX3CL1P78423 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AL139095.3-201ENST00000419672 1203 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.46□□□□□ -1.86
CX3CL1P78423 COX6CP17-201ENST00000421389 185 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AL365338.1-201ENST00000422282 858 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 RPS27AP7-201ENST00000422792 455 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AC092832.1-201ENST00000422934 400 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AL445669.1-201ENST00000426743 755 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 RPEP2-201ENST00000432149 701 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AC118469.1-201ENST00000442943 488 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 PHBP16-201ENST00000446318 950 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AP000542.1-201ENST00000448473 371 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AL645939.1-201ENST00000453429 797 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AC079804.1-201ENST00000461922 436 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 RPL35AP15-201ENST00000468042 339 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 RN7SL810P-201ENST00000493031 276 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AC006499.5-201ENST00000505037 514 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AC022447.3-201ENST00000506865 495 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.46□□□□□ -1.86
CX3CL1P78423 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AC092851.1-201ENST00000535964 478 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AL121766.1-201ENST00000547436 487 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.46□□□□□ -1.86
CX3CL1P78423 SETP7-201ENST00000552169 453 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 PCMTD1P2-201ENST00000565017 355 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.46□□□□□ -1.86
CX3CL1P78423 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.46□□□□□ -1.86
CX3CL1P78423 PIGPP4-201ENST00000584447 307 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AC008507.1-201ENST00000587506 734 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.46□□□□□ -1.86
CX3CL1P78423 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.46□□□□□ -1.86
CX3CL1P78423 AC025946.2-201ENST00000603398 234 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AL022161.1-201ENST00000604390 213 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AC113403.1-201ENST00000604910 193 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AL365503.1-201ENST00000605247 905 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 AL021997.2-201ENST00000615674 271 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.46□□□□□ -1.86
CX3CL1P78423 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CX3CL1P78423 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.46□□□□□ -1.86
CX3CL1P78423 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CX3CL1P78423 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CX3CL1P78423 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CX3CL1P78423 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms