Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLTCL1P53675 RNA5SP456-201ENST00000364002 114 ntBASIC3.48□□□□□ -1.85
CLTCL1P53675 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.48□□□□□ -1.85
CLTCL1P53675 BX276092.3-201ENST00000424182 230 ntBASIC3.48□□□□□ -1.85
CLTCL1P53675 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.48□□□□□ -1.85
CLTCL1P53675 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.48□□□□□ -1.85
CLTCL1P53675 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.48□□□□□ -1.85
CLTCL1P53675 snoU13.23-201ENST00000458863 104 ntBASIC3.48□□□□□ -1.85
CLTCL1P53675 ATP5F1P5-201ENST00000526403 760 ntBASIC3.48□□□□□ -1.85
CLTCL1P53675 MIR4648-201ENST00000580107 72 ntBASIC3.48□□□□□ -1.85
CLTCL1P53675 AC061975.8-201ENST00000587058 721 ntBASIC3.48□□□□□ -1.85
CLTCL1P53675 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLTCL1P53675 MIR1291-201ENST00000627649 87 ntBASIC3.48□□□□□ -1.85
CLTCL1P53675 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLTCL1P53675 AC092079.1-201ENST00000558620 1985 ntBASIC3.47□□□□□ -1.85
CLTCL1P53675 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLTCL1P53675 MTND5P6-201ENST00000422338 1798 ntBASIC3.47□□□□□ -1.85
CLTCL1P53675 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.47□□□□□ -1.85
CLTCL1P53675 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLTCL1P53675 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CLTCL1P53675 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CLTCL1P53675 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.47□□□□□ -1.85
CLTCL1P53675 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.47□□□□□ -1.85
CLTCL1P53675 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.47□□□□□ -1.85
CLTCL1P53675 AC084035.1-201ENST00000634543 607 ntBASIC3.47□□□□□ -1.85
CLTCL1P53675 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLTCL1P53675 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.85
CLTCL1P53675 RNU6-328P-201ENST00000390887 106 ntBASIC3.46□□□□□ -1.86
CLTCL1P53675 RPS12P2-201ENST00000439728 269 ntBASIC3.46□□□□□ -1.86
CLTCL1P53675 GSTA11P-201ENST00000452866 669 ntBASIC3.46□□□□□ -1.86
CLTCL1P53675 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.46□□□□□ -1.86
CLTCL1P53675 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.46□□□□□ -1.86
CLTCL1P53675 MIR1273D-201ENST00000577266 86 ntBASIC3.46□□□□□ -1.86
CLTCL1P53675 AC090312.2-201ENST00000582687 378 ntBASIC3.46□□□□□ -1.86
CLTCL1P53675 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.46□□□□□ -1.86
CLTCL1P53675 AC006116.7-201ENST00000590141 756 ntBASIC3.46□□□□□ -1.86
CLTCL1P53675 AC046143.2-201ENST00000609789 160 ntBASIC3.46□□□□□ -1.86
CLTCL1P53675 AL162233.1-201ENST00000620014 944 ntBASIC3.46□□□□□ -1.86
CLTCL1P53675 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLTCL1P53675 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CLTCL1P53675 AL445437.1-201ENST00000623157 3087 ntBASIC3.46□□□□□ -1.86
CLTCL1P53675 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLTCL1P53675 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CLTCL1P53675 AC092326.2-201ENST00000624772 1561 ntBASIC3.46□□□□□ -1.86
CLTCL1P53675 FAM133CP-201ENST00000332869 704 ntBASIC3.45□□□□□ -1.86
CLTCL1P53675 AL079342.1-201ENST00000401460 267 ntBASIC3.45□□□□□ -1.86
CLTCL1P53675 RN7SKP140-201ENST00000411196 284 ntBASIC3.45□□□□□ -1.86
CLTCL1P53675 RAP1BP1-201ENST00000412709 553 ntBASIC3.45□□□□□ -1.86
CLTCL1P53675 AC234781.4-201ENST00000419384 244 ntBASIC3.45□□□□□ -1.86
CLTCL1P53675 ATG3P1-201ENST00000419507 911 ntBASIC3.45□□□□□ -1.86
CLTCL1P53675 AL137014.1-201ENST00000420490 1226 ntBASIC3.45□□□□□ -1.86
CLTCL1P53675 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.45□□□□□ -1.86
CLTCL1P53675 FAM103A2P-201ENST00000444122 354 ntBASIC3.45□□□□□ -1.86
CLTCL1P53675 MIR4506-201ENST00000584693 77 ntBASIC3.45□□□□□ -1.86
CLTCL1P53675 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.45□□□□□ -1.86
CLTCL1P53675 AL356274.1-201ENST00000617064 410 ntBASIC3.45□□□□□ -1.86
CLTCL1P53675 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.45□□□□□ -1.86
CLTCL1P53675 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLTCL1P53675 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLTCL1P53675 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLTCL1P53675 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLTCL1P53675 OR51A3P-201ENST00000413596 924 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 AL158825.1-201ENST00000414735 521 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 AL034379.1-201ENST00000423216 253 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 ARF4P2-201ENST00000430209 526 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 AC018634.1-201ENST00000437554 401 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 Z99127.2-201ENST00000441426 334 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 RPL36AP33-201ENST00000450395 310 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 MTCO3P13-201ENST00000577757 781 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.44□□□□□ -1.86
CLTCL1P53675 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLTCL1P53675 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CLTCL1P53675 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLTCL1P53675 AL024474.1-201ENST00000404655 591 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.44□□□□□ -1.86
CLTCL1P53675 HMGN2P3-201ENST00000433603 273 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 HMGN2P5-201ENST00000436882 273 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 AL049830.2-201ENST00000480072 201 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 AC026436.1-201ENST00000510537 270 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 AC021269.2-201ENST00000532318 330 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.44□□□□□ -1.86
CLTCL1P53675 HMGB3P26-201ENST00000560051 582 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 AC078899.3-201ENST00000599065 212 ntBASIC3.44□□□□□ -1.86
CLTCL1P53675 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.44□□□□□ -1.86
CLTCL1P53675 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLTCL1P53675 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLTCL1P53675 DYNLT3P1-201ENST00000378574 347 ntBASIC3.43□□□□□ -1.86
CLTCL1P53675 FAT1P1-201ENST00000406588 507 ntBASIC3.43□□□□□ -1.86
CLTCL1P53675 AL512430.2-201ENST00000406786 339 ntBASIC3.43□□□□□ -1.86
CLTCL1P53675 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLTCL1P53675 COX6CP2-201ENST00000444980 225 ntBASIC3.43□□□□□ -1.86
CLTCL1P53675 IFNA11P-201ENST00000446352 526 ntBASIC3.43□□□□□ -1.86
CLTCL1P53675 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
CLTCL1P53675 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.43□□□□□ -1.86
CLTCL1P53675 AC108860.1-201ENST00000484521 383 ntBASIC3.43□□□□□ -1.86
CLTCL1P53675 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.43□□□□□ -1.86
CLTCL1P53675 AC008837.1-201ENST00000511513 412 ntBASIC3.43□□□□□ -1.86
CLTCL1P53675 RNA5SP385-201ENST00000515947 110 ntBASIC3.43□□□□□ -1.86
CLTCL1P53675 RNA5SP281-201ENST00000516504 135 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms