Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC135001.1-201ENST00000544546 283 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPN9P43378 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.2□□□□□ -1.74
PTPN9P43378 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPN9P43378 AP005136.1-201ENST00000579765 429 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPN9P43378 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.2□□□□□ -1.74
PTPN9P43378 AC004223.2-201ENST00000590309 544 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 WISP1-OT1-201ENST00000602893 642 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 BNIP3P11-201ENST00000603878 563 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AL358072.1-201ENST00000604156 575 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 RNU4-89P-201ENST00000607443 133 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AC245008.1-201ENST00000608123 476 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 MIR6868-201ENST00000611215 58 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.2□□□□□ -1.74
PTPN9P43378 AC008443.7-201ENST00000622195 246 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.2□□□□□ -1.74
PTPN9P43378 AC007494.3-201ENST00000624660 743 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 AC006927.3-201ENST00000638789 384 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 OR5BE1P-202ENST00000641168 1176 ntBASIC4.2□□□□□ -1.74
PTPN9P43378 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PTPN9P43378 CR381670.1-201ENST00000624291 1693 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPN9P43378 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPN9P43378 AC095050.2-201ENST00000510748 1458 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 AL121657.1-201ENST00000327215 531 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 RN7SKP44-201ENST00000363602 316 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 RNU6-1279P-201ENST00000383917 103 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 RPS3AP26-201ENST00000398259 784 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 EIF5P1-201ENST00000400019 1231 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 RAB28P1-201ENST00000411517 641 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPN9P43378 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPN9P43378 AC093698.1-201ENST00000423843 571 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 BX119904.4-201ENST00000424402 301 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPN9P43378 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPN9P43378 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPN9P43378 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPN9P43378 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.19□□□□□ -1.74
PTPN9P43378 BX276092.4-201ENST00000452056 248 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPN9P43378 USP9YP34-201ENST00000453983 808 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 RN7SL860P-201ENST00000473738 223 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 AL132838.2-201ENST00000492041 314 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 AC146944.2-203ENST00000502493 354 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 AC108941.1-201ENST00000502853 530 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.19□□□□□ -1.74
PTPN9P43378 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.19□□□□□ -1.74
PTPN9P43378 AC139495.1-202ENST00000513164 354 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
PTPN9P43378 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPN9P43378 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPN9P43378 RFPL1S-203ENST00000539579 330 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 AC092470.1-201ENST00000546187 132 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 AC091516.1-201ENST00000549191 703 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPN9P43378 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPN9P43378 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPN9P43378 MTCYBP33-201ENST00000575007 1130 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 MIR5186-201ENST00000577504 120 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 AC011260.1-201ENST00000578420 472 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPN9P43378 AF131215.7-201ENST00000602443 707 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 AL590392.1-201ENST00000604960 446 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 AL591034.3-201ENST00000605511 685 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 AC135507.1-201ENST00000607214 561 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 AC092653.1-201ENST00000608509 531 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 MIR6867-201ENST00000610636 67 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PTPN9P43378 MIR4496-201ENST00000635896 61 ntBASIC4.19□□□□□ -1.74
PTPN9P43378 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPN9P43378 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPN9P43378 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN9P43378 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN9P43378 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN9P43378 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
PTPN9P43378 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN9P43378 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPN9P43378 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPN9P43378 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN9P43378 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PTPN9P43378 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN9P43378 AL049693.1-201ENST00000402760 611 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN9P43378 JKAMPP1-201ENST00000413804 919 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPN9P43378 MED14P1-201ENST00000430517 648 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN9P43378 RPL7P28-201ENST00000437739 740 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 SNRPEP7-201ENST00000438350 220 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 AC083863.1-201ENST00000438811 231 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.18□□□□□ -1.74
PTPN9P43378 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN9P43378 RPL5P32-201ENST00000454085 879 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 RPS7P7-201ENST00000463499 571 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 RN7SL385P-201ENST00000468873 276 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN9P43378 AC090453.1-201ENST00000495560 436 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms